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Cluster: CGMR063381_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_111916 k141_111916_32 43824 46847 - GH141
pfam k141_111916 k141_111916_33 47000 47872 - DHDPS
TF k141_111916 k141_111916_34 48023 48826 + HTH_AraC | HTH_AraC
CAZyme k141_111916 k141_111916_35 48838 49812 - CE2
NULL(UNKNOWN) k141_111916 k141_111916_36 49886 50959 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_111916 k141_111916_37 51125 53098 + GH151
pfam k141_111916 k141_111916_38 53139 55211 - Topoisom_bac | Zn_ribbon_Top1 | Zn_ribbon_Top1 | Zn_ribbon_Top1 | Toprim
TC k141_111916 k141_111916_39 55233 56393 - 3.A.11.1.3
CAZyme k141_111916 k141_111916_40 56653 60669 + CE17
CAZyme k141_111916 k141_111916_41 60849 64865 + CE17
CAZyme k141_111916 k141_111916_42 64905 65744 - CE4
Gene ID: k141_111916_32
Type: CAZyme
Location: 43824 - 46847 (-)
Gene ID: k141_111916_33
Type: pfam
Location: 47000 - 47872 (-)
Gene ID: k141_111916_34
Type: TF
Location: 48023 - 48826 (+)
Gene ID: k141_111916_35
Type: CAZyme
Location: 48838 - 49812 (-)
Gene ID: k141_111916_36
Type:
Location: 49886 - 50959 (-)
Gene ID: k141_111916_37
Type: CAZyme
Location: 51125 - 53098 (+)
Gene ID: k141_111916_38
Type: pfam
Location: 53139 - 55211 (-)
Gene ID: k141_111916_39
Type: TC
Location: 55233 - 56393 (-)
Gene ID: k141_111916_40
Type: CAZyme
Location: 56653 - 60669 (+)
Gene ID: k141_111916_41
Type: CAZyme
Location: 60849 - 64865 (+)
Gene ID: k141_111916_42
Type: CAZyme
Location: 64905 - 65744 (-)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1381
Family
UBA9506

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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