Cluster: CGMR063173_CGC11
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR063173
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_406811 | k141_406811_34 | 31759 | 32649 | + | GT2 |
| pfam | k141_406811 | k141_406811_35 | 32640 | 33581 | + | PS_pyruv_trans |
| CAZyme | k141_406811 | k141_406811_36 | 33685 | 34617 | + | GT2 |
| pfam | k141_406811 | k141_406811_37 | 34614 | 35600 | + | Glyco_tranf_2_4 |
| CAZyme | k141_406811 | k141_406811_38 | 35607 | 36566 | + | GT2 |
| pfam | k141_406811 | k141_406811_39 | 36573 | 37727 | + | Epimerase_2 |
| TC | k141_406811 | k141_406811_40 | 37812 | 38915 | - | 3.A.1.105.4 |
| TC | k141_406811 | k141_406811_41 | 38918 | 40012 | - | 3.A.1.105.4 |
| TC | k141_406811 | k141_406811_42 | 40016 | 40756 | - | 3.A.1.105.15 |
| TC | k141_406811 | k141_406811_43 | 40753 | 41652 | - | 3.A.1.105.15 |
| TC | k141_406811 | k141_406811_44 | 41654 | 42538 | - | 3.A.1.105.4 |
| pfam | k141_406811 | k141_406811_45 | 42542 | 43819 | - | OEP | OEP |
| STP | k141_406811 | k141_406811_46 | 43824 | 44498 | - | TetR_N |
| CAZyme | k141_406811 | k141_406811_47 | 44822 | 45553 | + | GT32 |
| CAZyme | k141_406811 | k141_406811_48 | 45677 | 46603 | + | GT4 |
Gene ID: k141_406811_34
Type: CAZyme
Location: 31759 - 32649 (+)
Type: CAZyme
Location: 31759 - 32649 (+)
Gene ID: k141_406811_35
Type: pfam
Location: 32640 - 33581 (+)
Type: pfam
Location: 32640 - 33581 (+)
Gene ID: k141_406811_36
Type: CAZyme
Location: 33685 - 34617 (+)
Type: CAZyme
Location: 33685 - 34617 (+)
Gene ID: k141_406811_37
Type: pfam
Location: 34614 - 35600 (+)
Type: pfam
Location: 34614 - 35600 (+)
Gene ID: k141_406811_38
Type: CAZyme
Location: 35607 - 36566 (+)
Type: CAZyme
Location: 35607 - 36566 (+)
Gene ID: k141_406811_39
Type: pfam
Location: 36573 - 37727 (+)
Type: pfam
Location: 36573 - 37727 (+)
Gene ID: k141_406811_40
Type: TC
Location: 37812 - 38915 (-)
Type: TC
Location: 37812 - 38915 (-)
Gene ID: k141_406811_41
Type: TC
Location: 38918 - 40012 (-)
Type: TC
Location: 38918 - 40012 (-)
Gene ID: k141_406811_42
Type: TC
Location: 40016 - 40756 (-)
Type: TC
Location: 40016 - 40756 (-)
Gene ID: k141_406811_43
Type: TC
Location: 40753 - 41652 (-)
Type: TC
Location: 40753 - 41652 (-)
Gene ID: k141_406811_44
Type: TC
Location: 41654 - 42538 (-)
Type: TC
Location: 41654 - 42538 (-)
Gene ID: k141_406811_45
Type: pfam
Location: 42542 - 43819 (-)
Type: pfam
Location: 42542 - 43819 (-)
Gene ID: k141_406811_46
Type: STP
Location: 43824 - 44498 (-)
Type: STP
Location: 43824 - 44498 (-)
Gene ID: k141_406811_47
Type: CAZyme
Location: 44822 - 45553 (+)
Type: CAZyme
Location: 44822 - 45553 (+)
Gene ID: k141_406811_48
Type: CAZyme
Location: 45677 - 46603 (+)
Type: CAZyme
Location: 45677 - 46603 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
UBA4363
Species
UBA4363 sp017646805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.