Cluster: CGMR063116_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR063116
- CGC Family ID: CGCFAM_02316
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_146 | k141_146_56 | 64695 | 66074 | + | 4.A.1.2.11 |
| CAZyme | k141_146 | k141_146_57 | 66222 | 67631 | + | GH1 |
| TF | k141_146 | k141_146_58 | 67871 | 68569 | - | Trans_reg_C |
| STP | k141_146 | k141_146_59 | 68544 | 71249 | - | HATPase_c | HisKA |
| TC | k141_146 | k141_146_60 | 71309 | 71899 | - | 3.A.3.7.2 |
| TC | k141_146 | k141_146_61 | 71915 | 73981 | - | 3.A.3.7.1 |
| TC | k141_146 | k141_146_62 | 73998 | 75737 | - | 3.A.3.7.1 |
Gene ID: k141_146_56
Type: TC
Location: 64695 - 66074 (+)
Type: TC
Location: 64695 - 66074 (+)
Gene ID: k141_146_57
Type: CAZyme
Location: 66222 - 67631 (+)
Type: CAZyme
Location: 66222 - 67631 (+)
Gene ID: k141_146_58
Type: TF
Location: 67871 - 68569 (-)
Type: TF
Location: 67871 - 68569 (-)
Gene ID: k141_146_59
Type: STP
Location: 68544 - 71249 (-)
Type: STP
Location: 68544 - 71249 (-)
Gene ID: k141_146_60
Type: TC
Location: 71309 - 71899 (-)
Type: TC
Location: 71309 - 71899 (-)
Gene ID: k141_146_61
Type: TC
Location: 71915 - 73981 (-)
Type: TC
Location: 71915 - 73981 (-)
Gene ID: k141_146_62
Type: TC
Location: 73998 - 75737 (-)
Type: TC
Location: 73998 - 75737 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium tertium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.