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Cluster: CGMR063116_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_34795 k141_34795_20 22629 24380 - 8.A.59.2.1
TF k141_34795 k141_34795_21 24355 25923 - HTH_AraC
CAZyme k141_34795 k141_34795_22 26012 29443 - GH2
TC k141_34795 k141_34795_23 29590 30450 - 3.A.1.1.4
TC k141_34795 k141_34795_24 30443 31339 - 3.A.1.1.4
TC k141_34795 k141_34795_25 31427 32731 - 3.A.1.1.4
NULL(UNKNOWN) k141_34795 k141_34795_26 33089 34249 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_34795 k141_34795_27 34264 35346 - GT4
pfam k141_34795 k141_34795_28 35402 35884 - Glyco_tran_28_C
TC k141_34795 k141_34795_29 35918 37375 - 2.A.66.2.16
CAZyme k141_34795 k141_34795_30 37579 38550 - GT2
CAZyme k141_34795 k141_34795_31 38563 39264 - GT32
Gene ID: k141_34795_20
Type: TC
Location: 22629 - 24380 (-)
Gene ID: k141_34795_21
Type: TF
Location: 24355 - 25923 (-)
Gene ID: k141_34795_22
Type: CAZyme
Location: 26012 - 29443 (-)
Gene ID: k141_34795_23
Type: TC
Location: 29590 - 30450 (-)
Gene ID: k141_34795_24
Type: TC
Location: 30443 - 31339 (-)
Gene ID: k141_34795_25
Type: TC
Location: 31427 - 32731 (-)
Gene ID: k141_34795_26
Type:
Location: 33089 - 34249 (-)
Gene ID: k141_34795_27
Type: CAZyme
Location: 34264 - 35346 (-)
Gene ID: k141_34795_28
Type: pfam
Location: 35402 - 35884 (-)
Gene ID: k141_34795_29
Type: TC
Location: 35918 - 37375 (-)
Gene ID: k141_34795_30
Type: CAZyme
Location: 37579 - 38550 (-)
Gene ID: k141_34795_31
Type: CAZyme
Location: 38563 - 39264 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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