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Cluster: CGMR063116_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_3085 k141_3085_20 24556 31404 - CBM32 | CBM32 | GH31_18
NULL(UNKNOWN) k141_3085 k141_3085_21 31947 32468 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_3085 k141_3085_22 32468 33607 - CE9
TC k141_3085 k141_3085_23 33808 34239 + 4.A.6.1.14
pfam k141_3085 k141_3085_24 34208 34519 + YajC
TF k141_3085 k141_3085_25 34551 35720 - HTH_AraC | HTH_AraC
TC k141_3085 k141_3085_26 36095 36571 + 4.A.6.1.4
TC k141_3085 k141_3085_27 36591 37403 + 4.A.6.1.4
TC k141_3085 k141_3085_28 37393 38238 + 4.A.6.1.4
Gene ID: k141_3085_20
Type: CAZyme
Location: 24556 - 31404 (-)
Gene ID: k141_3085_21
Type:
Location: 31947 - 32468 (-)
Gene ID: k141_3085_22
Type: CAZyme
Location: 32468 - 33607 (-)
Gene ID: k141_3085_23
Type: TC
Location: 33808 - 34239 (+)
Gene ID: k141_3085_24
Type: pfam
Location: 34208 - 34519 (+)
Gene ID: k141_3085_25
Type: TF
Location: 34551 - 35720 (-)
Gene ID: k141_3085_26
Type: TC
Location: 36095 - 36571 (+)
Gene ID: k141_3085_27
Type: TC
Location: 36591 - 37403 (+)
Gene ID: k141_3085_28
Type: TC
Location: 37393 - 38238 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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