Cluster: CGMR063116_CGC39
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR063116
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5002 | k141_5002_4 | 2288 | 3574 | - | 2.A.26.1.5 |
| pfam | k141_5002 | k141_5002_5 | 4198 | 4791 | + | Ribosomal_S4 | S4 |
| pfam | k141_5002 | k141_5002_6 | 4917 | 5465 | - | Ribosomal_L25p | Ribosomal_TL5_C |
| TC | k141_5002 | k141_5002_7 | 5966 | 6433 | + | 9.B.10.1.1 |
| pfam | k141_5002 | k141_5002_8 | 6788 | 7639 | + | DegV |
| pfam | k141_5002 | k141_5002_9 | 7662 | 8192 | + | DUF1836 |
| CAZyme | k141_5002 | k141_5002_10 | 8412 | 10601 | + | GH36 |
| STP | k141_5002 | k141_5002_11 | 10784 | 12673 | + | SBP_bac_5 |
| TC | k141_5002 | k141_5002_12 | 12745 | 13719 | + | 3.A.1.5.9 |
| TC | k141_5002 | k141_5002_13 | 13724 | 14638 | + | 3.A.1.5.9 |
| TC | k141_5002 | k141_5002_14 | 14650 | 15693 | + | 3.A.1.5.13 |
| TC | k141_5002 | k141_5002_15 | 15671 | 16681 | + | 3.A.1.5.9 |
| NULL(UNKNOWN) | k141_5002 | k141_5002_16 | 16627 | 16920 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_5002 | k141_5002_17 | 16904 | 17917 | + | GH26 |
| NULL(UNKNOWN) | k141_5002 | k141_5002_18 | 17943 | 18134 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_5002 | k141_5002_19 | 18233 | 20008 | - | 8.A.59.2.1 |
Gene ID: k141_5002_4
Type: TC
Location: 2288 - 3574 (-)
Type: TC
Location: 2288 - 3574 (-)
Gene ID: k141_5002_5
Type: pfam
Location: 4198 - 4791 (+)
Type: pfam
Location: 4198 - 4791 (+)
Gene ID: k141_5002_6
Type: pfam
Location: 4917 - 5465 (-)
Type: pfam
Location: 4917 - 5465 (-)
Gene ID: k141_5002_7
Type: TC
Location: 5966 - 6433 (+)
Type: TC
Location: 5966 - 6433 (+)
Gene ID: k141_5002_8
Type: pfam
Location: 6788 - 7639 (+)
Type: pfam
Location: 6788 - 7639 (+)
Gene ID: k141_5002_9
Type: pfam
Location: 7662 - 8192 (+)
Type: pfam
Location: 7662 - 8192 (+)
Gene ID: k141_5002_10
Type: CAZyme
Location: 8412 - 10601 (+)
Type: CAZyme
Location: 8412 - 10601 (+)
Gene ID: k141_5002_11
Type: STP
Location: 10784 - 12673 (+)
Type: STP
Location: 10784 - 12673 (+)
Gene ID: k141_5002_12
Type: TC
Location: 12745 - 13719 (+)
Type: TC
Location: 12745 - 13719 (+)
Gene ID: k141_5002_13
Type: TC
Location: 13724 - 14638 (+)
Type: TC
Location: 13724 - 14638 (+)
Gene ID: k141_5002_14
Type: TC
Location: 14650 - 15693 (+)
Type: TC
Location: 14650 - 15693 (+)
Gene ID: k141_5002_15
Type: TC
Location: 15671 - 16681 (+)
Type: TC
Location: 15671 - 16681 (+)
Gene ID: k141_5002_16
Type:
Location: 16627 - 16920 (+)
Type:
Location: 16627 - 16920 (+)
Gene ID: k141_5002_17
Type: CAZyme
Location: 16904 - 17917 (+)
Type: CAZyme
Location: 16904 - 17917 (+)
Gene ID: k141_5002_18
Type:
Location: 17943 - 18134 (+)
Type:
Location: 17943 - 18134 (+)
Gene ID: k141_5002_19
Type: TC
Location: 18233 - 20008 (-)
Type: TC
Location: 18233 - 20008 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium tertium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.