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Cluster: CGMR063116_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4312 k141_4312_25 20882 22234 - 4.A.3.2.2
CAZyme k141_4312 k141_4312_26 22646 23737 - GH170
TC k141_4312 k141_4312_27 23730 23993 - 4.A.3.2.2
TC k141_4312 k141_4312_28 24077 24385 - 4.A.3.2.2
TF k141_4312 k141_4312_29 24583 27315 - TrmB
TC k141_4312 k141_4312_30 27472 28794 - 2.A.3.2.5
TC k141_4312 k141_4312_31 29098 31533 - 3.A.3.5.15
pfam k141_4312 k141_4312_32 31765 32556 - ABC2_membrane_6
pfam k141_4312 k141_4312_33 32558 33376 - ABC2_membrane_6
TC k141_4312 k141_4312_34 33380 34408 - 3.A.1.141.1
Gene ID: k141_4312_25
Type: TC
Location: 20882 - 22234 (-)
Gene ID: k141_4312_26
Type: CAZyme
Location: 22646 - 23737 (-)
Gene ID: k141_4312_27
Type: TC
Location: 23730 - 23993 (-)
Gene ID: k141_4312_28
Type: TC
Location: 24077 - 24385 (-)
Gene ID: k141_4312_29
Type: TF
Location: 24583 - 27315 (-)
Gene ID: k141_4312_30
Type: TC
Location: 27472 - 28794 (-)
Gene ID: k141_4312_31
Type: TC
Location: 29098 - 31533 (-)
Gene ID: k141_4312_32
Type: pfam
Location: 31765 - 32556 (-)
Gene ID: k141_4312_33
Type: pfam
Location: 32558 - 33376 (-)
Gene ID: k141_4312_34
Type: TC
Location: 33380 - 34408 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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