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Cluster: CGMR063116_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15041 k141_15041_13 12379 13212 - 3.A.1.24.5
TC k141_15041 k141_15041_14 13349 13987 - 3.A.1.24.5
TC k141_15041 k141_15041_15 13987 15024 - 3.A.1.24.2
pfam k141_15041 k141_15041_16 15361 15657 - DUF503
CAZyme k141_15041 k141_15041_17 15791 17272 - GH77
TF k141_15041 k141_15041_18 17493 18515 - LacI
TC k141_15041 k141_15041_19 18608 19501 - 3.A.1.1.6
TC k141_15041 k141_15041_20 19503 20420 - 3.A.1.1.22
TC k141_15041 k141_15041_21 20482 21690 - 3.A.1.1.2
pfam k141_15041 k141_15041_22 21808 22755 - HTH_30
NULL(UNKNOWN) k141_15041 k141_15041_23 23045 23236 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_15041 k141_15041_24 23312 23965 - 9.B.27.2.3
pfam k141_15041 k141_15041_25 24065 24607 - PAP2
pfam k141_15041 k141_15041_26 24634 25260 - TED
TC k141_15041 k141_15041_27 25461 25775 - 4.A.3.2.2
TC k141_15041 k141_15041_28 25794 27128 - 4.A.3.2.9
TC k141_15041 k141_15041_29 27170 27475 - 4.A.3.2.8
CAZyme k141_15041 k141_15041_30 27554 29131 - GH1
TF k141_15041 k141_15041_31 29341 30069 - HTH_6
CAZyme k141_15041 k141_15041_32 30245 31651 - GH1
NULL(UNKNOWN) k141_15041 k141_15041_33 31701 31934 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_15041 k141_15041_34 32316 35663 + CBM26 | GH13_42
CAZyme k141_15041 k141_15041_35 35774 36832 - GH18
NULL(UNKNOWN) k141_15041 k141_15041_36 36846 38054 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_15041 k141_15041_37 38054 38530 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_15041 k141_15041_38 38520 40403 - GT2
CAZyme k141_15041 k141_15041_39 40428 41543 - CE4
Gene ID: k141_15041_13
Type: TC
Location: 12379 - 13212 (-)
Gene ID: k141_15041_14
Type: TC
Location: 13349 - 13987 (-)
Gene ID: k141_15041_15
Type: TC
Location: 13987 - 15024 (-)
Gene ID: k141_15041_16
Type: pfam
Location: 15361 - 15657 (-)
Gene ID: k141_15041_17
Type: CAZyme
Location: 15791 - 17272 (-)
Gene ID: k141_15041_18
Type: TF
Location: 17493 - 18515 (-)
Gene ID: k141_15041_19
Type: TC
Location: 18608 - 19501 (-)
Gene ID: k141_15041_20
Type: TC
Location: 19503 - 20420 (-)
Gene ID: k141_15041_21
Type: TC
Location: 20482 - 21690 (-)
Gene ID: k141_15041_22
Type: pfam
Location: 21808 - 22755 (-)
Gene ID: k141_15041_23
Type:
Location: 23045 - 23236 (-)
Gene ID: k141_15041_24
Type: TC
Location: 23312 - 23965 (-)
Gene ID: k141_15041_25
Type: pfam
Location: 24065 - 24607 (-)
Gene ID: k141_15041_26
Type: pfam
Location: 24634 - 25260 (-)
Gene ID: k141_15041_27
Type: TC
Location: 25461 - 25775 (-)
Gene ID: k141_15041_28
Type: TC
Location: 25794 - 27128 (-)
Gene ID: k141_15041_29
Type: TC
Location: 27170 - 27475 (-)
Gene ID: k141_15041_30
Type: CAZyme
Location: 27554 - 29131 (-)
Gene ID: k141_15041_31
Type: TF
Location: 29341 - 30069 (-)
Gene ID: k141_15041_32
Type: CAZyme
Location: 30245 - 31651 (-)
Gene ID: k141_15041_33
Type:
Location: 31701 - 31934 (-)
Gene ID: k141_15041_34
Type: CAZyme
Location: 32316 - 35663 (+)
Gene ID: k141_15041_35
Type: CAZyme
Location: 35774 - 36832 (-)
Gene ID: k141_15041_36
Type:
Location: 36846 - 38054 (-)
Gene ID: k141_15041_37
Type:
Location: 38054 - 38530 (-)
Gene ID: k141_15041_38
Type: CAZyme
Location: 38520 - 40403 (-)
Gene ID: k141_15041_39
Type: CAZyme
Location: 40428 - 41543 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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