Cluster: CGMR062954_CGC52
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR062954
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_121472 | k141_121472_43 | 55220 | 56425 | - | GT4 |
| CAZyme | k141_121472 | k141_121472_44 | 56446 | 57426 | - | GT2 |
| CAZyme | k141_121472 | k141_121472_45 | 57456 | 59057 | - | GT2 |
| pfam | k141_121472 | k141_121472_46 | 59096 | 60898 | - | DUF2142 |
| pfam | k141_121472 | k141_121472_47 | 60927 | 62060 | - | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | k141_121472 | k141_121472_48 | 62103 | 63113 | - | GT2 |
| CAZyme | k141_121472 | k141_121472_49 | 63149 | 65092 | - | GT2 |
| TC | k141_121472 | k141_121472_50 | 65157 | 66689 | - | 2.A.66.1.40 |
| CAZyme | k141_121472 | k141_121472_51 | 66720 | 67694 | - | GT2 |
| pfam | k141_121472 | k141_121472_52 | 67681 | 68766 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| pfam | k141_121472 | k141_121472_53 | 68789 | 69205 | - | DUF2304 |
| CAZyme | k141_121472 | k141_121472_54 | 69215 | 69907 | - | GT2 |
| CAZyme | k141_121472 | k141_121472_55 | 69949 | 70773 | - | GT2 |
Gene ID: k141_121472_43
Type: CAZyme
Location: 55220 - 56425 (-)
Type: CAZyme
Location: 55220 - 56425 (-)
Gene ID: k141_121472_44
Type: CAZyme
Location: 56446 - 57426 (-)
Type: CAZyme
Location: 56446 - 57426 (-)
Gene ID: k141_121472_45
Type: CAZyme
Location: 57456 - 59057 (-)
Type: CAZyme
Location: 57456 - 59057 (-)
Gene ID: k141_121472_46
Type: pfam
Location: 59096 - 60898 (-)
Type: pfam
Location: 59096 - 60898 (-)
Gene ID: k141_121472_47
Type: pfam
Location: 60927 - 62060 (-)
Type: pfam
Location: 60927 - 62060 (-)
Gene ID: k141_121472_48
Type: CAZyme
Location: 62103 - 63113 (-)
Type: CAZyme
Location: 62103 - 63113 (-)
Gene ID: k141_121472_49
Type: CAZyme
Location: 63149 - 65092 (-)
Type: CAZyme
Location: 63149 - 65092 (-)
Gene ID: k141_121472_50
Type: TC
Location: 65157 - 66689 (-)
Type: TC
Location: 65157 - 66689 (-)
Gene ID: k141_121472_51
Type: CAZyme
Location: 66720 - 67694 (-)
Type: CAZyme
Location: 66720 - 67694 (-)
Gene ID: k141_121472_52
Type: pfam
Location: 67681 - 68766 (-)
Type: pfam
Location: 67681 - 68766 (-)
Gene ID: k141_121472_53
Type: pfam
Location: 68789 - 69205 (-)
Type: pfam
Location: 68789 - 69205 (-)
Gene ID: k141_121472_54
Type: CAZyme
Location: 69215 - 69907 (-)
Type: CAZyme
Location: 69215 - 69907 (-)
Gene ID: k141_121472_55
Type: CAZyme
Location: 69949 - 70773 (-)
Type: CAZyme
Location: 69949 - 70773 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.