Cluster: CGMR062954_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062954
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_273800 | k141_273800_12 | 10654 | 14157 | + | GH3 |
| CAZyme | k141_273800 | k141_273800_13 | 14335 | 16782 | + | GH3 |
| NULL(UNKNOWN) | k141_273800 | k141_273800_14 | 16863 | 17456 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_273800 | k141_273800_15 | 17559 | 19595 | + | PKD |
| TC | k141_273800 | k141_273800_16 | 19615 | 20976 | + | 2.A.2.3.3 |
| TF | k141_273800 | k141_273800_17 | 21092 | 22408 | + | HTH_AraC |
| pfam | k141_273800 | k141_273800_18 | 22539 | 23363 | + | Hydrolase_3 |
| TC | k141_273800 | k141_273800_19 | 23787 | 25175 | + | 2.A.2.3.6 |
Gene ID: k141_273800_12
Type: CAZyme
Location: 10654 - 14157 (+)
Type: CAZyme
Location: 10654 - 14157 (+)
Gene ID: k141_273800_13
Type: CAZyme
Location: 14335 - 16782 (+)
Type: CAZyme
Location: 14335 - 16782 (+)
Gene ID: k141_273800_14
Type:
Location: 16863 - 17456 (+)
Type:
Location: 16863 - 17456 (+)
Gene ID: k141_273800_15
Type: pfam
Location: 17559 - 19595 (+)
Type: pfam
Location: 17559 - 19595 (+)
Gene ID: k141_273800_16
Type: TC
Location: 19615 - 20976 (+)
Type: TC
Location: 19615 - 20976 (+)
Gene ID: k141_273800_17
Type: TF
Location: 21092 - 22408 (+)
Type: TF
Location: 21092 - 22408 (+)
Gene ID: k141_273800_18
Type: pfam
Location: 22539 - 23363 (+)
Type: pfam
Location: 22539 - 23363 (+)
Gene ID: k141_273800_19
Type: TC
Location: 23787 - 25175 (+)
Type: TC
Location: 23787 - 25175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.