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Cluster: CGMR062954_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_461062 k141_461062_10 9617 10504 - GT2
CAZyme k141_461062 k141_461062_11 10505 11320 - GT111
CAZyme k141_461062 k141_461062_12 11444 12562 - GT2
pfam k141_461062 k141_461062_13 12867 13016 - FeoB_associated
TC k141_461062 k141_461062_14 13061 15451 - 9.A.8.1.6
STP k141_461062 k141_461062_15 15456 15683 - FeoA
STP k141_461062 k141_461062_16 15708 15920 - FeoA
TC k141_461062 k141_461062_17 16152 17555 + 2.A.66.1.13
pfam k141_461062 k141_461062_18 17552 18157 + TetR_C_8
CAZyme k141_461062 k141_461062_19 18308 19084 - CE4
Gene ID: k141_461062_10
Type: CAZyme
Location: 9617 - 10504 (-)
Gene ID: k141_461062_11
Type: CAZyme
Location: 10505 - 11320 (-)
Gene ID: k141_461062_12
Type: CAZyme
Location: 11444 - 12562 (-)
Gene ID: k141_461062_13
Type: pfam
Location: 12867 - 13016 (-)
Gene ID: k141_461062_14
Type: TC
Location: 13061 - 15451 (-)
Gene ID: k141_461062_15
Type: STP
Location: 15456 - 15683 (-)
Gene ID: k141_461062_16
Type: STP
Location: 15708 - 15920 (-)
Gene ID: k141_461062_17
Type: TC
Location: 16152 - 17555 (+)
Gene ID: k141_461062_18
Type: pfam
Location: 17552 - 18157 (+)
Gene ID: k141_461062_19
Type: CAZyme
Location: 18308 - 19084 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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