Cluster: CGMR062954_CGC47
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062954
- CGC Family ID: CGCFAM_00051
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_28699 | k141_28699_1 | 3 | 593 | - | 9.B.10.1.1 |
| pfam | k141_28699 | k141_28699_2 | 810 | 1448 | + | LUD_dom |
| CAZyme | k141_28699 | k141_28699_3 | 1459 | 2529 | - | GH43_24 |
| TF | k141_28699 | k141_28699_4 | 2689 | 3741 | + | HTH_AraC |
| CAZyme | k141_28699 | k141_28699_5 | 3720 | 5825 | - | GH3 |
Gene ID: k141_28699_1
Type: TC
Location: 3 - 593 (-)
Type: TC
Location: 3 - 593 (-)
Gene ID: k141_28699_2
Type: pfam
Location: 810 - 1448 (+)
Type: pfam
Location: 810 - 1448 (+)
Gene ID: k141_28699_3
Type: CAZyme
Location: 1459 - 2529 (-)
Type: CAZyme
Location: 1459 - 2529 (-)
Gene ID: k141_28699_4
Type: TF
Location: 2689 - 3741 (+)
Type: TF
Location: 2689 - 3741 (+)
Gene ID: k141_28699_5
Type: CAZyme
Location: 3720 - 5825 (-)
Type: CAZyme
Location: 3720 - 5825 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.