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Cluster: CGMR062954_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_436911 k141_436911_12 14286 16553 + CBM67 | GH78
TF k141_436911 k141_436911_13 16554 17636 - HTH_AraC
sulfatase k141_436911 k141_436911_14 17859 19475 + S1_26
TC k141_436911 k141_436911_15 19568 21070 + 2.A.2.3.3
CAZyme k141_436911 k141_436911_16 21084 23606 + GH2
CAZyme k141_436911 k141_436911_17 23662 26322 + GH78
CAZyme k141_436911 k141_436911_18 26319 27785 + GH43_35
NULL(UNKNOWN) k141_436911 k141_436911_19 27939 29345 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_436911 k141_436911_20 29556 30275 - HTH_AraC
CAZyme k141_436911 k141_436911_21 30505 32142 + GH43_35
Gene ID: k141_436911_12
Type: CAZyme
Location: 14286 - 16553 (+)
Gene ID: k141_436911_13
Type: TF
Location: 16554 - 17636 (-)
Gene ID: k141_436911_14
Type: sulfatase
Location: 17859 - 19475 (+)
Gene ID: k141_436911_15
Type: TC
Location: 19568 - 21070 (+)
Gene ID: k141_436911_16
Type: CAZyme
Location: 21084 - 23606 (+)
Gene ID: k141_436911_17
Type: CAZyme
Location: 23662 - 26322 (+)
Gene ID: k141_436911_18
Type: CAZyme
Location: 26319 - 27785 (+)
Gene ID: k141_436911_19
Type:
Location: 27939 - 29345 (+)
Gene ID: k141_436911_20
Type: TF
Location: 29556 - 30275 (-)
Gene ID: k141_436911_21
Type: CAZyme
Location: 30505 - 32142 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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