Cluster: CGMR062954_CGC40
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR062954
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_22397 | k141_22397_1 | 216 | 1850 | + | 4.C.1.1.6 |
| pfam | k141_22397 | k141_22397_2 | 1865 | 2557 | + | S1 | S1 | S1_RRP5 |
| TF | k141_22397 | k141_22397_3 | 2630 | 3622 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_22397 | k141_22397_4 | 3785 | 6775 | + | GH106 |
| TC | k141_22397 | k141_22397_5 | 6840 | 8192 | + | 2.A.2.3.3 |
| TF | k141_22397 | k141_22397_6 | 8268 | 9290 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_22397 | k141_22397_7 | 9355 | 9783 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_22397 | k141_22397_8 | 9882 | 11417 | - | 2.A.21.2.5 |
Gene ID: k141_22397_1
Type: TC
Location: 216 - 1850 (+)
Type: TC
Location: 216 - 1850 (+)
Gene ID: k141_22397_2
Type: pfam
Location: 1865 - 2557 (+)
Type: pfam
Location: 1865 - 2557 (+)
Gene ID: k141_22397_3
Type: TF
Location: 2630 - 3622 (-)
Type: TF
Location: 2630 - 3622 (-)
Gene ID: k141_22397_4
Type: CAZyme
Location: 3785 - 6775 (+)
Type: CAZyme
Location: 3785 - 6775 (+)
Gene ID: k141_22397_5
Type: TC
Location: 6840 - 8192 (+)
Type: TC
Location: 6840 - 8192 (+)
Gene ID: k141_22397_6
Type: TF
Location: 8268 - 9290 (-)
Type: TF
Location: 8268 - 9290 (-)
Gene ID: k141_22397_7
Type:
Location: 9355 - 9783 (-)
Type:
Location: 9355 - 9783 (-)
Gene ID: k141_22397_8
Type: TC
Location: 9882 - 11417 (-)
Type: TC
Location: 9882 - 11417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.