dbCAN Logo

Cluster: CGMR062954_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_441838 k141_441838_28 29482 32028 - GH2
TF k141_441838 k141_441838_29 32223 33494 + HTH_AraC
TC k141_441838 k141_441838_30 33533 34630 - 9.A.23.1.1
NULL(UNKNOWN) k141_441838 k141_441838_31 34757 35020 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_441838 k141_441838_32 35055 35255 + HTH_AraC
CAZyme k141_441838 k141_441838_33 35252 37711 - GH2
pfam k141_441838 k141_441838_34 37731 38855 - Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_441838 k141_441838_35 38876 40447 - GH43_35
peptidase k141_441838 k141_441838_36 40465 41499 - S09.UPW
pfam k141_441838 k141_441838_37 41496 42212 - Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_441838 k141_441838_38 42221 44638 - GH2
TC k141_441838 k141_441838_39 44625 46106 - 2.A.2.1.1
Gene ID: k141_441838_28
Type: CAZyme
Location: 29482 - 32028 (-)
Gene ID: k141_441838_29
Type: TF
Location: 32223 - 33494 (+)
Gene ID: k141_441838_30
Type: TC
Location: 33533 - 34630 (-)
Gene ID: k141_441838_31
Type:
Location: 34757 - 35020 (-)
Gene ID: k141_441838_32
Type: TF
Location: 35055 - 35255 (+)
Gene ID: k141_441838_33
Type: CAZyme
Location: 35252 - 37711 (-)
Gene ID: k141_441838_34
Type: pfam
Location: 37731 - 38855 (-)
Gene ID: k141_441838_35
Type: CAZyme
Location: 38876 - 40447 (-)
Gene ID: k141_441838_36
Type: peptidase
Location: 40465 - 41499 (-)
Gene ID: k141_441838_37
Type: pfam
Location: 41496 - 42212 (-)
Gene ID: k141_441838_38
Type: CAZyme
Location: 42221 - 44638 (-)
Gene ID: k141_441838_39
Type: TC
Location: 44625 - 46106 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List