Cluster: CGMR062954_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062954
- CGC Family ID: CGCFAM_05161
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_21387 | k141_21387_51 | 47573 | 49216 | + | GH20 |
| CAZyme | k141_21387 | k141_21387_52 | 49233 | 50465 | + | CE9 |
| pfam | k141_21387 | k141_21387_53 | 50515 | 51714 | - | MFS_1 |
| TF | k141_21387 | k141_21387_54 | 51868 | 52860 | + | HTH_AraC |
| TC | k141_21387 | k141_21387_55 | 52857 | 53714 | + | 8.A.5.1.4 |
Gene ID: k141_21387_51
Type: CAZyme
Location: 47573 - 49216 (+)
Type: CAZyme
Location: 47573 - 49216 (+)
Gene ID: k141_21387_52
Type: CAZyme
Location: 49233 - 50465 (+)
Type: CAZyme
Location: 49233 - 50465 (+)
Gene ID: k141_21387_53
Type: pfam
Location: 50515 - 51714 (-)
Type: pfam
Location: 50515 - 51714 (-)
Gene ID: k141_21387_54
Type: TF
Location: 51868 - 52860 (+)
Type: TF
Location: 51868 - 52860 (+)
Gene ID: k141_21387_55
Type: TC
Location: 52857 - 53714 (+)
Type: TC
Location: 52857 - 53714 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.