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Cluster: CGMR062954_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_254591 k141_254591_51 50992 53583 + GH2
pfam k141_254591 k141_254591_52 53716 54333 - Flavodoxin_2 | FMN_red
TC k141_254591 k141_254591_53 54375 56012 - 8.A.7.1.1
TC k141_254591 k141_254591_54 56017 56502 - 4.A.2.1.4
STP k141_254591 k141_254591_55 56502 57434 - PfkB
pfam k141_254591 k141_254591_56 57671 58546 - PseudoU_synth_1 | PseudoU_synth_1
TC k141_254591 k141_254591_57 58693 59250 + 3.A.1.25.5
TC k141_254591 k141_254591_58 59342 60733 + 2.A.66.1.32
Gene ID: k141_254591_51
Type: CAZyme
Location: 50992 - 53583 (+)
Gene ID: k141_254591_52
Type: pfam
Location: 53716 - 54333 (-)
Gene ID: k141_254591_53
Type: TC
Location: 54375 - 56012 (-)
Gene ID: k141_254591_54
Type: TC
Location: 56017 - 56502 (-)
Gene ID: k141_254591_55
Type: STP
Location: 56502 - 57434 (-)
Gene ID: k141_254591_56
Type: pfam
Location: 57671 - 58546 (-)
Gene ID: k141_254591_57
Type: TC
Location: 58693 - 59250 (+)
Gene ID: k141_254591_58
Type: TC
Location: 59342 - 60733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_254591_52 vegetarian > vegan 1.24730 0.01287

🧭 Explore Read Mapping of CGC

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