Cluster: CGMR062954_CGC20
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR062954
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_439420 | k141_439420_21 | 26770 | 27693 | - | 3.A.1.1.9 |
| TC | k141_439420 | k141_439420_22 | 27712 | 28662 | - | 3.A.1.1.10 |
| NULL(UNKNOWN) | k141_439420 | k141_439420_23 | 28721 | 30508 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_439420 | k141_439420_24 | 30660 | 31298 | - | 9.B.28.1.8 |
| NULL(UNKNOWN) | k141_439420 | k141_439420_25 | 31300 | 31800 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_439420 | k141_439420_26 | 32197 | 34626 | - | GH3 |
| CAZyme | k141_439420 | k141_439420_27 | 34744 | 35859 | - | GH43_24 |
| CAZyme | k141_439420 | k141_439420_28 | 35875 | 37962 | - | GH42 |
| CAZyme | k141_439420 | k141_439420_29 | 37996 | 40272 | - | GH3 |
| CAZyme | k141_439420 | k141_439420_30 | 40289 | 42745 | - | CBM67 | GH78 |
| pfam | k141_439420 | k141_439420_31 | 42832 | 43863 | - | Peptidase_S9 | Abhydrolase_3 | BD-FAE |
| TF | k141_439420 | k141_439420_32 | 43946 | 45211 | - | HTH_AraC | HTH_AraC |
| TC | k141_439420 | k141_439420_33 | 45377 | 46753 | - | 2.A.2.3.2 |
| NULL(UNKNOWN) | k141_439420 | k141_439420_34 | 46777 | 48846 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_439420 | k141_439420_35 | 49052 | 50419 | - | GH43_2 |
Gene ID: k141_439420_21
Type: TC
Location: 26770 - 27693 (-)
Type: TC
Location: 26770 - 27693 (-)
Gene ID: k141_439420_22
Type: TC
Location: 27712 - 28662 (-)
Type: TC
Location: 27712 - 28662 (-)
Gene ID: k141_439420_23
Type:
Location: 28721 - 30508 (-)
Type:
Location: 28721 - 30508 (-)
Gene ID: k141_439420_24
Type: TC
Location: 30660 - 31298 (-)
Type: TC
Location: 30660 - 31298 (-)
Gene ID: k141_439420_25
Type:
Location: 31300 - 31800 (-)
Type:
Location: 31300 - 31800 (-)
Gene ID: k141_439420_26
Type: CAZyme
Location: 32197 - 34626 (-)
Type: CAZyme
Location: 32197 - 34626 (-)
Gene ID: k141_439420_27
Type: CAZyme
Location: 34744 - 35859 (-)
Type: CAZyme
Location: 34744 - 35859 (-)
Gene ID: k141_439420_28
Type: CAZyme
Location: 35875 - 37962 (-)
Type: CAZyme
Location: 35875 - 37962 (-)
Gene ID: k141_439420_29
Type: CAZyme
Location: 37996 - 40272 (-)
Type: CAZyme
Location: 37996 - 40272 (-)
Gene ID: k141_439420_30
Type: CAZyme
Location: 40289 - 42745 (-)
Type: CAZyme
Location: 40289 - 42745 (-)
Gene ID: k141_439420_31
Type: pfam
Location: 42832 - 43863 (-)
Type: pfam
Location: 42832 - 43863 (-)
Gene ID: k141_439420_32
Type: TF
Location: 43946 - 45211 (-)
Type: TF
Location: 43946 - 45211 (-)
Gene ID: k141_439420_33
Type: TC
Location: 45377 - 46753 (-)
Type: TC
Location: 45377 - 46753 (-)
Gene ID: k141_439420_34
Type:
Location: 46777 - 48846 (-)
Type:
Location: 46777 - 48846 (-)
Gene ID: k141_439420_35
Type: CAZyme
Location: 49052 - 50419 (-)
Type: CAZyme
Location: 49052 - 50419 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.