Cluster: CGMR062954_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062954
- CGC Family ID: CGCFAM_08628
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_439420 | k141_439420_5 | 4989 | 6461 | - | 2.A.2.1.2 |
| TF | k141_439420 | k141_439420_6 | 6551 | 7804 | - | HTH_AraC |
| pfam | k141_439420 | k141_439420_7 | 7807 | 8439 | - | Hydrolase | HAD_2 |
| CAZyme | k141_439420 | k141_439420_8 | 8463 | 10220 | - | GH3 |
| TF | k141_439420 | k141_439420_9 | 10320 | 11420 | - | HTH_AraC |
| CAZyme | k141_439420 | k141_439420_10 | 11599 | 13080 | + | GH30_1 |
Gene ID: k141_439420_5
Type: TC
Location: 4989 - 6461 (-)
Type: TC
Location: 4989 - 6461 (-)
Gene ID: k141_439420_6
Type: TF
Location: 6551 - 7804 (-)
Type: TF
Location: 6551 - 7804 (-)
Gene ID: k141_439420_7
Type: pfam
Location: 7807 - 8439 (-)
Type: pfam
Location: 7807 - 8439 (-)
Gene ID: k141_439420_8
Type: CAZyme
Location: 8463 - 10220 (-)
Type: CAZyme
Location: 8463 - 10220 (-)
Gene ID: k141_439420_9
Type: TF
Location: 10320 - 11420 (-)
Type: TF
Location: 10320 - 11420 (-)
Gene ID: k141_439420_10
Type: CAZyme
Location: 11599 - 13080 (+)
Type: CAZyme
Location: 11599 - 13080 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.