Cluster: CGMR062954_CGC18
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR062954
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_328704 | k141_328704_3 | 3970 | 6285 | - | GH94 |
| CAZyme | k141_328704 | k141_328704_4 | 6282 | 8813 | - | GH3 |
| CAZyme | k141_328704 | k141_328704_5 | 8845 | 11277 | - | GH148 |
| TF | k141_328704 | k141_328704_6 | 11589 | 12782 | + | HTH_AraC | HTH_AraC |
| pfam | k141_328704 | k141_328704_7 | 12877 | 14406 | - | PQQ_2 | PQQ_2 |
| TC | k141_328704 | k141_328704_8 | 14521 | 15504 | - | 3.A.1.32.2 |
| TC | k141_328704 | k141_328704_9 | 15474 | 17198 | - | 3.A.1.32.2 |
| TC | k141_328704 | k141_328704_10 | 17186 | 18073 | - | 3.A.1.32.2 |
| pfam | k141_328704 | k141_328704_11 | 18130 | 19020 | - | DUF4430 |
| pfam | k141_328704 | k141_328704_12 | 19824 | 20756 | - | Aldose_epim |
| TC | k141_328704 | k141_328704_13 | 20876 | 22330 | - | 2.A.38.1.1 |
| STP | k141_328704 | k141_328704_14 | 22350 | 23708 | - | TrkA_C | TrkA_C |
| peptidase | k141_328704 | k141_328704_15 | 23929 | 25758 | - | S08.114 |
| TC | k141_328704 | k141_328704_16 | 25755 | 27401 | - | 2.A.21.9.2 |
Gene ID: k141_328704_3
Type: CAZyme
Location: 3970 - 6285 (-)
Type: CAZyme
Location: 3970 - 6285 (-)
Gene ID: k141_328704_4
Type: CAZyme
Location: 6282 - 8813 (-)
Type: CAZyme
Location: 6282 - 8813 (-)
Gene ID: k141_328704_5
Type: CAZyme
Location: 8845 - 11277 (-)
Type: CAZyme
Location: 8845 - 11277 (-)
Gene ID: k141_328704_6
Type: TF
Location: 11589 - 12782 (+)
Type: TF
Location: 11589 - 12782 (+)
Gene ID: k141_328704_7
Type: pfam
Location: 12877 - 14406 (-)
Type: pfam
Location: 12877 - 14406 (-)
Gene ID: k141_328704_8
Type: TC
Location: 14521 - 15504 (-)
Type: TC
Location: 14521 - 15504 (-)
Gene ID: k141_328704_9
Type: TC
Location: 15474 - 17198 (-)
Type: TC
Location: 15474 - 17198 (-)
Gene ID: k141_328704_10
Type: TC
Location: 17186 - 18073 (-)
Type: TC
Location: 17186 - 18073 (-)
Gene ID: k141_328704_11
Type: pfam
Location: 18130 - 19020 (-)
Type: pfam
Location: 18130 - 19020 (-)
Gene ID: k141_328704_12
Type: pfam
Location: 19824 - 20756 (-)
Type: pfam
Location: 19824 - 20756 (-)
Gene ID: k141_328704_13
Type: TC
Location: 20876 - 22330 (-)
Type: TC
Location: 20876 - 22330 (-)
Gene ID: k141_328704_14
Type: STP
Location: 22350 - 23708 (-)
Type: STP
Location: 22350 - 23708 (-)
Gene ID: k141_328704_15
Type: peptidase
Location: 23929 - 25758 (-)
Type: peptidase
Location: 23929 - 25758 (-)
Gene ID: k141_328704_16
Type: TC
Location: 25755 - 27401 (-)
Type: TC
Location: 25755 - 27401 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.