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Cluster: CGMR062954_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_276386 k141_276386_66 76668 77579 + 3.A.1.144.2
TC k141_276386 k141_276386_67 77576 78355 + 3.A.1.144.2
NULL(UNKNOWN) k141_276386 k141_276386_68 78378 78542 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_276386 k141_276386_69 78607 80301 - 3.A.1.134.9
TC k141_276386 k141_276386_70 80294 80866 - 3.A.1.134.4
STP k141_276386 k141_276386_71 81039 81599 - HATPase_c
TF k141_276386 k141_276386_72 81645 82316 - Trans_reg_C
CAZyme k141_276386 k141_276386_73 82336 83844 - GH51_1
Gene ID: k141_276386_66
Type: TC
Location: 76668 - 77579 (+)
Gene ID: k141_276386_67
Type: TC
Location: 77576 - 78355 (+)
Gene ID: k141_276386_68
Type:
Location: 78378 - 78542 (-)
Gene ID: k141_276386_69
Type: TC
Location: 78607 - 80301 (-)
Gene ID: k141_276386_70
Type: TC
Location: 80294 - 80866 (-)
Gene ID: k141_276386_71
Type: STP
Location: 81039 - 81599 (-)
Gene ID: k141_276386_72
Type: TF
Location: 81645 - 82316 (-)
Gene ID: k141_276386_73
Type: CAZyme
Location: 82336 - 83844 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_276386_70 vegetarian > vegan 1.41100 0.01287

🧭 Explore Read Mapping of CGC

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