Cluster: CGMR062954_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062954
- CGC Family ID: CGCFAM_08625
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_433453 | k141_433453_62 | 67715 | 70267 | - | GH3 |
| TC | k141_433453 | k141_433453_63 | 70365 | 71741 | - | 2.A.66.1.26 |
| STP | k141_433453 | k141_433453_64 | 71987 | 72562 | + | TetR_N |
| NULL(UNKNOWN) | k141_433453 | k141_433453_65 | 72583 | 74154 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_433453 | k141_433453_66 | 74147 | 74854 | - | 3.A.1.147.2 |
| CAZyme | k141_433453 | k141_433453_67 | 75222 | 76838 | + | GH39 |
Gene ID: k141_433453_62
Type: CAZyme
Location: 67715 - 70267 (-)
Type: CAZyme
Location: 67715 - 70267 (-)
Gene ID: k141_433453_63
Type: TC
Location: 70365 - 71741 (-)
Type: TC
Location: 70365 - 71741 (-)
Gene ID: k141_433453_64
Type: STP
Location: 71987 - 72562 (+)
Type: STP
Location: 71987 - 72562 (+)
Gene ID: k141_433453_65
Type:
Location: 72583 - 74154 (-)
Type:
Location: 72583 - 74154 (-)
Gene ID: k141_433453_66
Type: TC
Location: 74147 - 74854 (-)
Type: TC
Location: 74147 - 74854 (-)
Gene ID: k141_433453_67
Type: CAZyme
Location: 75222 - 76838 (+)
Type: CAZyme
Location: 75222 - 76838 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_433453_66 | vegetarian > vegan | 1.00115 | 0.01287 |