Cluster: CGMR062688_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR062688
- CGC Family ID: CGCFAM_02316
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_35883 | k141_35883_44 | 43120 | 44538 | + | GH13_20 |
| CAZyme | k141_35883 | k141_35883_45 | 44540 | 46435 | + | CBM48 | GH13_9 |
| TF | k141_35883 | k141_35883_46 | 46475 | 47173 | + | Trans_reg_C |
| STP | k141_35883 | k141_35883_47 | 47183 | 49462 | + | HATPase_c | HisKA |
| CAZyme | k141_35883 | k141_35883_48 | 49508 | 50941 | - | GH1 |
| TC | k141_35883 | k141_35883_49 | 50954 | 52852 | - | 4.A.1.2.11 |
Gene ID: k141_35883_44
Type: CAZyme
Location: 43120 - 44538 (+)
Type: CAZyme
Location: 43120 - 44538 (+)
Gene ID: k141_35883_45
Type: CAZyme
Location: 44540 - 46435 (+)
Type: CAZyme
Location: 44540 - 46435 (+)
Gene ID: k141_35883_46
Type: TF
Location: 46475 - 47173 (+)
Type: TF
Location: 46475 - 47173 (+)
Gene ID: k141_35883_47
Type: STP
Location: 47183 - 49462 (+)
Type: STP
Location: 47183 - 49462 (+)
Gene ID: k141_35883_48
Type: CAZyme
Location: 49508 - 50941 (-)
Type: CAZyme
Location: 49508 - 50941 (-)
Gene ID: k141_35883_49
Type: TC
Location: 50954 - 52852 (-)
Type: TC
Location: 50954 - 52852 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A sp944383765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.