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Cluster: CGMR062688_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_34070 k141_34070_30 31398 32765 + GT2
NULL(UNKNOWN) k141_34070 k141_34070_31 32781 32999 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_34070 k141_34070_32 33086 34108 + FA_synthesis
TC k141_34070 k141_34070_33 34111 34341 + 3.D.1.6.4
pfam k141_34070 k141_34070_34 34425 35132 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
pfam k141_34070 k141_34070_35 35141 38701 + SMC_N | SMC_hinge | AAA_15 | AAA_21 | AAA_23
TC k141_34070 k141_34070_36 38713 39648 + 3.A.5.1.1
TC k141_34070 k141_34070_37 39671 40930 + 2.A.49.9.2
pfam k141_34070 k141_34070_38 40943 41716 + H2O2_YaaD
STP k141_34070 k141_34070_39 41795 42139 + Sigma70_r4
TC k141_34070 k141_34070_40 42163 43533 + 3.A.5.2.2
Gene ID: k141_34070_30
Type: CAZyme
Location: 31398 - 32765 (+)
Gene ID: k141_34070_31
Type:
Location: 32781 - 32999 (+)
Gene ID: k141_34070_32
Type: pfam
Location: 33086 - 34108 (+)
Gene ID: k141_34070_33
Type: TC
Location: 34111 - 34341 (+)
Gene ID: k141_34070_34
Type: pfam
Location: 34425 - 35132 (+)
Gene ID: k141_34070_35
Type: pfam
Location: 35141 - 38701 (+)
Gene ID: k141_34070_36
Type: TC
Location: 38713 - 39648 (+)
Gene ID: k141_34070_37
Type: TC
Location: 39671 - 40930 (+)
Gene ID: k141_34070_38
Type: pfam
Location: 40943 - 41716 (+)
Gene ID: k141_34070_39
Type: STP
Location: 41795 - 42139 (+)
Gene ID: k141_34070_40
Type: TC
Location: 42163 - 43533 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_34070_33 vegetarian > omnivore 2.57755 0.02248

🧭 Explore Read Mapping of CGC

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