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Cluster: CGMR062688_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_7967 k141_7967_19 22208 23323 - 2.A.86.1.9
pfam k141_7967 k141_7967_20 23435 24166 - PseudoU_synth_2
TC k141_7967 k141_7967_21 24274 24924 + 1.C.113.1.2
pfam k141_7967 k141_7967_22 24946 25662 - GDPD
TC k141_7967 k141_7967_23 25679 26521 - 3.A.1.5.4
TC k141_7967 k141_7967_24 26528 27454 - 3.A.1.5.11
TC k141_7967 k141_7967_25 27451 28458 - 3.A.1.5.20
TC k141_7967 k141_7967_26 28406 29416 - 3.A.1.5.15
TC k141_7967 k141_7967_27 29434 31038 - 3.A.1.5.4
TF k141_7967 k141_7967_28 31217 32152 + HTH_1
pfam k141_7967 k141_7967_29 32214 32471 - GIY-YIG
CAZyme k141_7967 k141_7967_30 32652 34217 - CBM50
Gene ID: k141_7967_19
Type: TC
Location: 22208 - 23323 (-)
Gene ID: k141_7967_20
Type: pfam
Location: 23435 - 24166 (-)
Gene ID: k141_7967_21
Type: TC
Location: 24274 - 24924 (+)
Gene ID: k141_7967_22
Type: pfam
Location: 24946 - 25662 (-)
Gene ID: k141_7967_23
Type: TC
Location: 25679 - 26521 (-)
Gene ID: k141_7967_24
Type: TC
Location: 26528 - 27454 (-)
Gene ID: k141_7967_25
Type: TC
Location: 27451 - 28458 (-)
Gene ID: k141_7967_26
Type: TC
Location: 28406 - 29416 (-)
Gene ID: k141_7967_27
Type: TC
Location: 29434 - 31038 (-)
Gene ID: k141_7967_28
Type: TF
Location: 31217 - 32152 (+)
Gene ID: k141_7967_29
Type: pfam
Location: 32214 - 32471 (-)
Gene ID: k141_7967_30
Type: CAZyme
Location: 32652 - 34217 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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