Cluster: CGMR062647_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR062647
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_411400 | k141_411400_47 | 46299 | 47645 | + | GH144 |
| TC | k141_411400 | k141_411400_48 | 47758 | 49950 | - | 3.A.7.7.1 |
| CAZyme | k141_411400 | k141_411400_49 | 50274 | 51428 | - | GH88 |
| TF | k141_411400 | k141_411400_50 | 51434 | 52297 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_411400 | k141_411400_51 | 52491 | 54104 | - | GH13_31 |
| NULL(UNKNOWN) | k141_411400 | k141_411400_52 | 54210 | 54848 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_411400 | k141_411400_53 | 54988 | 55812 | + | Mn_catalase |
| TC | k141_411400 | k141_411400_54 | 55942 | 58323 | - | 3.A.24.3.1 |
Gene ID: k141_411400_47
Type: CAZyme
Location: 46299 - 47645 (+)
Type: CAZyme
Location: 46299 - 47645 (+)
Gene ID: k141_411400_48
Type: TC
Location: 47758 - 49950 (-)
Type: TC
Location: 47758 - 49950 (-)
Gene ID: k141_411400_49
Type: CAZyme
Location: 50274 - 51428 (-)
Type: CAZyme
Location: 50274 - 51428 (-)
Gene ID: k141_411400_50
Type: TF
Location: 51434 - 52297 (-)
Type: TF
Location: 51434 - 52297 (-)
Gene ID: k141_411400_51
Type: CAZyme
Location: 52491 - 54104 (-)
Type: CAZyme
Location: 52491 - 54104 (-)
Gene ID: k141_411400_52
Type:
Location: 54210 - 54848 (+)
Type:
Location: 54210 - 54848 (+)
Gene ID: k141_411400_53
Type: pfam
Location: 54988 - 55812 (+)
Type: pfam
Location: 54988 - 55812 (+)
Gene ID: k141_411400_54
Type: TC
Location: 55942 - 58323 (-)
Type: TC
Location: 55942 - 58323 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Aerococcaceae
Genus
Jeotgalibaca
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.