Cluster: CGMR062568_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062568
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_7186 | k141_7186_7 | 5702 | 7042 | - | 2.A.22.5.3 |
| TF | k141_7186 | k141_7186_8 | 7251 | 7496 | + | HTH_3 |
| CAZyme | k141_7186 | k141_7186_9 | 7516 | 8535 | + | GT2 |
| pfam | k141_7186 | k141_7186_10 | 8532 | 9353 | + | LicD |
| TC | k141_7186 | k141_7186_11 | 9346 | 10917 | + | 2.A.66.1.40 |
| pfam | k141_7186 | k141_7186_12 | 10914 | 11609 | + | DNA_alkylation |
| pfam | k141_7186 | k141_7186_13 | 11654 | 12643 | + | YceG |
| CAZyme | k141_7186 | k141_7186_14 | 12660 | 14882 | + | GT4 |
| pfam | k141_7186 | k141_7186_15 | 14882 | 15139 | + | TSCPD |
| pfam | k141_7186 | k141_7186_16 | 15237 | 16199 | + | PMI_typeI_cat | MPI_cupin_dom |
| TC | k141_7186 | k141_7186_17 | 16260 | 17357 | + | 9.B.146.1.1 |
| pfam | k141_7186 | k141_7186_18 | 17350 | 18498 | + | Epimerase_2 |
| TC | k141_7186 | k141_7186_19 | 18519 | 19652 | + | 2.A.86.1.11 |
Gene ID: k141_7186_7
Type: TC
Location: 5702 - 7042 (-)
Type: TC
Location: 5702 - 7042 (-)
Gene ID: k141_7186_8
Type: TF
Location: 7251 - 7496 (+)
Type: TF
Location: 7251 - 7496 (+)
Gene ID: k141_7186_9
Type: CAZyme
Location: 7516 - 8535 (+)
Type: CAZyme
Location: 7516 - 8535 (+)
Gene ID: k141_7186_10
Type: pfam
Location: 8532 - 9353 (+)
Type: pfam
Location: 8532 - 9353 (+)
Gene ID: k141_7186_11
Type: TC
Location: 9346 - 10917 (+)
Type: TC
Location: 9346 - 10917 (+)
Gene ID: k141_7186_12
Type: pfam
Location: 10914 - 11609 (+)
Type: pfam
Location: 10914 - 11609 (+)
Gene ID: k141_7186_13
Type: pfam
Location: 11654 - 12643 (+)
Type: pfam
Location: 11654 - 12643 (+)
Gene ID: k141_7186_14
Type: CAZyme
Location: 12660 - 14882 (+)
Type: CAZyme
Location: 12660 - 14882 (+)
Gene ID: k141_7186_15
Type: pfam
Location: 14882 - 15139 (+)
Type: pfam
Location: 14882 - 15139 (+)
Gene ID: k141_7186_16
Type: pfam
Location: 15237 - 16199 (+)
Type: pfam
Location: 15237 - 16199 (+)
Gene ID: k141_7186_17
Type: TC
Location: 16260 - 17357 (+)
Type: TC
Location: 16260 - 17357 (+)
Gene ID: k141_7186_18
Type: pfam
Location: 17350 - 18498 (+)
Type: pfam
Location: 17350 - 18498 (+)
Gene ID: k141_7186_19
Type: TC
Location: 18519 - 19652 (+)
Type: TC
Location: 18519 - 19652 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
UMGS1810
Species
UMGS1810 sp900555295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.