Cluster: CGMR062568_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR062568
- CGC Family ID: CGCFAM_08821
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_116645 | k141_116645_17 | 15657 | 17603 | - | GH78 |
| pfam | k141_116645 | k141_116645_18 | 17634 | 18281 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | k141_116645 | k141_116645_19 | 18685 | 19956 | + | CE4 |
| CAZyme | k141_116645 | k141_116645_20 | 20060 | 21940 | + | CBM48 | GH13_9 |
| pfam | k141_116645 | k141_116645_21 | 22063 | 23241 | + | NTP_transferase | Hexapep_GlmU |
| pfam | k141_116645 | k141_116645_22 | 23258 | 24376 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_116645 | k141_116645_23 | 24394 | 25851 | + | GT5 |
| CAZyme | k141_116645 | k141_116645_24 | 25945 | 28356 | + | GT35 |
| CAZyme | k141_116645 | k141_116645_25 | 28470 | 30314 | + | GH13_39 |
| NULL(UNKNOWN) | k141_116645 | k141_116645_26 | 30333 | 31010 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_116645 | k141_116645_27 | 30991 | 31731 | + | Sigma70_r2 | Sigma70_r4 |
| TC | k141_116645 | k141_116645_28 | 32029 | 33453 | + | 2.A.25.1.4 |
Gene ID: k141_116645_17
Type: CAZyme
Location: 15657 - 17603 (-)
Type: CAZyme
Location: 15657 - 17603 (-)
Gene ID: k141_116645_18
Type: pfam
Location: 17634 - 18281 (-)
Type: pfam
Location: 17634 - 18281 (-)
Gene ID: k141_116645_19
Type: CAZyme
Location: 18685 - 19956 (+)
Type: CAZyme
Location: 18685 - 19956 (+)
Gene ID: k141_116645_20
Type: CAZyme
Location: 20060 - 21940 (+)
Type: CAZyme
Location: 20060 - 21940 (+)
Gene ID: k141_116645_21
Type: pfam
Location: 22063 - 23241 (+)
Type: pfam
Location: 22063 - 23241 (+)
Gene ID: k141_116645_22
Type: pfam
Location: 23258 - 24376 (+)
Type: pfam
Location: 23258 - 24376 (+)
Gene ID: k141_116645_23
Type: CAZyme
Location: 24394 - 25851 (+)
Type: CAZyme
Location: 24394 - 25851 (+)
Gene ID: k141_116645_24
Type: CAZyme
Location: 25945 - 28356 (+)
Type: CAZyme
Location: 25945 - 28356 (+)
Gene ID: k141_116645_25
Type: CAZyme
Location: 28470 - 30314 (+)
Type: CAZyme
Location: 28470 - 30314 (+)
Gene ID: k141_116645_26
Type:
Location: 30333 - 31010 (+)
Type:
Location: 30333 - 31010 (+)
Gene ID: k141_116645_27
Type: STP
Location: 30991 - 31731 (+)
Type: STP
Location: 30991 - 31731 (+)
Gene ID: k141_116645_28
Type: TC
Location: 32029 - 33453 (+)
Type: TC
Location: 32029 - 33453 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
UMGS1810
Species
UMGS1810 sp900555295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.