Cluster: CGMR062391_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: CGMR062391
- CGC Family ID: CGCFAM_00484
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_55459 | k141_55459_3 | 3140 | 5041 | - | 2.A.2.2.3 |
| CAZyme | k141_55459 | k141_55459_4 | 5056 | 7101 | - | GH42 |
| TF | k141_55459 | k141_55459_5 | 7223 | 8233 | + | LacI |
| TC | k141_55459 | k141_55459_6 | 8323 | 9429 | - | 3.A.1.1.20 |
| CAZyme | k141_55459 | k141_55459_7 | 9479 | 11320 | - | GH2 |
| NULL(UNKNOWN) | k141_55459 | k141_55459_8 | 11339 | 11710 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_55459 | k141_55459_9 | 11720 | 12583 | - | 3.A.1.1.36 |
| TC | k141_55459 | k141_55459_10 | 12583 | 13506 | - | 3.A.1.1.20 |
Gene ID: k141_55459_3
Type: TC
Location: 3140 - 5041 (-)
Type: TC
Location: 3140 - 5041 (-)
Gene ID: k141_55459_4
Type: CAZyme
Location: 5056 - 7101 (-)
Type: CAZyme
Location: 5056 - 7101 (-)
Gene ID: k141_55459_5
Type: TF
Location: 7223 - 8233 (+)
Type: TF
Location: 7223 - 8233 (+)
Gene ID: k141_55459_6
Type: TC
Location: 8323 - 9429 (-)
Type: TC
Location: 8323 - 9429 (-)
Gene ID: k141_55459_7
Type: CAZyme
Location: 9479 - 11320 (-)
Type: CAZyme
Location: 9479 - 11320 (-)
Gene ID: k141_55459_8
Type:
Location: 11339 - 11710 (-)
Type:
Location: 11339 - 11710 (-)
Gene ID: k141_55459_9
Type: TC
Location: 11720 - 12583 (-)
Type: TC
Location: 11720 - 12583 (-)
Gene ID: k141_55459_10
Type: TC
Location: 12583 - 13506 (-)
Type: TC
Location: 12583 - 13506 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella paramesenteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.