Cluster: CGMR062261_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR062261
- CGC Family ID: CGCFAM_01427
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_147421 | k141_147421_4 | 3279 | 4397 | - | GH103 |
| TC | k141_147421 | k141_147421_5 | 4399 | 5535 | - | 2.A.103.1.2 |
| peptidase | k141_147421 | k141_147421_6 | 5600 | 7690 | - | X52.001 |
| pfam | k141_147421 | k141_147421_7 | 7703 | 8194 | - | MreD |
| TC | k141_147421 | k141_147421_8 | 8181 | 9041 | - | 9.B.157.1.3 |
| TC | k141_147421 | k141_147421_9 | 9077 | 10129 | - | 9.B.157.1.3 |
| pfam | k141_147421 | k141_147421_10 | 10294 | 11043 | + | TIM |
| TC | k141_147421 | k141_147421_11 | 11068 | 11379 | + | 3.A.5.1.1 |
Gene ID: k141_147421_4
Type: CAZyme
Location: 3279 - 4397 (-)
Type: CAZyme
Location: 3279 - 4397 (-)
Gene ID: k141_147421_5
Type: TC
Location: 4399 - 5535 (-)
Type: TC
Location: 4399 - 5535 (-)
Gene ID: k141_147421_6
Type: peptidase
Location: 5600 - 7690 (-)
Type: peptidase
Location: 5600 - 7690 (-)
Gene ID: k141_147421_7
Type: pfam
Location: 7703 - 8194 (-)
Type: pfam
Location: 7703 - 8194 (-)
Gene ID: k141_147421_8
Type: TC
Location: 8181 - 9041 (-)
Type: TC
Location: 8181 - 9041 (-)
Gene ID: k141_147421_9
Type: TC
Location: 9077 - 10129 (-)
Type: TC
Location: 9077 - 10129 (-)
Gene ID: k141_147421_10
Type: pfam
Location: 10294 - 11043 (+)
Type: pfam
Location: 10294 - 11043 (+)
Gene ID: k141_147421_11
Type: TC
Location: 11068 - 11379 (+)
Type: TC
Location: 11068 - 11379 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cardiobacteriales
Family
Wohlfahrtiimonadaceae
Genus
Ignatzschineria
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.