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Cluster: CGMR062261_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_210862 k141_210862_5 4586 6202 - GT83
TF k141_210862 k141_210862_6 6187 6609 - FUR
pfam k141_210862 k141_210862_7 6876 7928 + FBPase | FBPase_C
TC k141_210862 k141_210862_8 8109 8660 + 2.A.56.3.3
TC k141_210862 k141_210862_9 8654 10066 + 2.A.56.3.4
TC k141_210862 k141_210862_10 10206 11303 + 2.A.56.3.4
TC k141_210862 k141_210862_11 11459 12565 + 2.A.56.3.3
pfam k141_210862 k141_210862_12 12643 13212 + EFP | EFP_N | Elong-fact-P_C
TC k141_210862 k141_210862_13 13246 13842 + 3.D.3.2.1
TC k141_210862 k141_210862_14 13842 15116 + 3.D.3.1.1
pfam k141_210862 k141_210862_15 15113 15934 + Cytochrom_C1
TC k141_210862 k141_210862_16 16035 16643 + 1.A.12.3.1
Gene ID: k141_210862_5
Type: CAZyme
Location: 4586 - 6202 (-)
Gene ID: k141_210862_6
Type: TF
Location: 6187 - 6609 (-)
Gene ID: k141_210862_7
Type: pfam
Location: 6876 - 7928 (+)
Gene ID: k141_210862_8
Type: TC
Location: 8109 - 8660 (+)
Gene ID: k141_210862_9
Type: TC
Location: 8654 - 10066 (+)
Gene ID: k141_210862_10
Type: TC
Location: 10206 - 11303 (+)
Gene ID: k141_210862_11
Type: TC
Location: 11459 - 12565 (+)
Gene ID: k141_210862_12
Type: pfam
Location: 12643 - 13212 (+)
Gene ID: k141_210862_13
Type: TC
Location: 13246 - 13842 (+)
Gene ID: k141_210862_14
Type: TC
Location: 13842 - 15116 (+)
Gene ID: k141_210862_15
Type: pfam
Location: 15113 - 15934 (+)
Gene ID: k141_210862_16
Type: TC
Location: 16035 - 16643 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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