Cluster: CGMR062247_CGC4
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR062247
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_371853 | k141_371853_74 | 62967 | 64169 | - | GT4 |
| CAZyme | k141_371853 | k141_371853_75 | 64171 | 65259 | - | GT4 |
| pfam | k141_371853 | k141_371853_76 | 65252 | 66385 | - | Epimerase_2 |
| pfam | k141_371853 | k141_371853_77 | 66389 | 67498 | - | Epimerase | Polysacc_synt_C |
| TC | k141_371853 | k141_371853_78 | 67498 | 68517 | - | 9.B.18.2.1 |
| CAZyme | k141_371853 | k141_371853_79 | 68522 | 69757 | - | GT4 |
| pfam | k141_371853 | k141_371853_80 | 69750 | 70634 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | k141_371853 | k141_371853_81 | 70634 | 71248 | - | 9.B.18.1.3 |
| TF | k141_371853 | k141_371853_82 | 71286 | 71897 | - | 0041905 |
| pfam | k141_371853 | k141_371853_83 | 72047 | 73249 | - | Wzz | GNVR |
| TC | k141_371853 | k141_371853_84 | 73418 | 75295 | + | 9.B.18.2.1 |
| pfam | k141_371853 | k141_371853_85 | 75365 | 76405 | - | Cu_amine_oxidN1 |
| TC | k141_371853 | k141_371853_86 | 76723 | 79689 | - | 9.B.67.1.3 |
| pfam | k141_371853 | k141_371853_87 | 79880 | 82120 | - | SLH |
| TC | k141_371853 | k141_371853_88 | 82363 | 83466 | - | 9.B.174.1.1 |
Gene ID: k141_371853_74
Type: CAZyme
Location: 62967 - 64169 (-)
Type: CAZyme
Location: 62967 - 64169 (-)
Gene ID: k141_371853_75
Type: CAZyme
Location: 64171 - 65259 (-)
Type: CAZyme
Location: 64171 - 65259 (-)
Gene ID: k141_371853_76
Type: pfam
Location: 65252 - 66385 (-)
Type: pfam
Location: 65252 - 66385 (-)
Gene ID: k141_371853_77
Type: pfam
Location: 66389 - 67498 (-)
Type: pfam
Location: 66389 - 67498 (-)
Gene ID: k141_371853_78
Type: TC
Location: 67498 - 68517 (-)
Type: TC
Location: 67498 - 68517 (-)
Gene ID: k141_371853_79
Type: CAZyme
Location: 68522 - 69757 (-)
Type: CAZyme
Location: 68522 - 69757 (-)
Gene ID: k141_371853_80
Type: pfam
Location: 69750 - 70634 (-)
Type: pfam
Location: 69750 - 70634 (-)
Gene ID: k141_371853_81
Type: TC
Location: 70634 - 71248 (-)
Type: TC
Location: 70634 - 71248 (-)
Gene ID: k141_371853_82
Type: TF
Location: 71286 - 71897 (-)
Type: TF
Location: 71286 - 71897 (-)
Gene ID: k141_371853_83
Type: pfam
Location: 72047 - 73249 (-)
Type: pfam
Location: 72047 - 73249 (-)
Gene ID: k141_371853_84
Type: TC
Location: 73418 - 75295 (+)
Type: TC
Location: 73418 - 75295 (+)
Gene ID: k141_371853_85
Type: pfam
Location: 75365 - 76405 (-)
Type: pfam
Location: 75365 - 76405 (-)
Gene ID: k141_371853_86
Type: TC
Location: 76723 - 79689 (-)
Type: TC
Location: 76723 - 79689 (-)
Gene ID: k141_371853_87
Type: pfam
Location: 79880 - 82120 (-)
Type: pfam
Location: 79880 - 82120 (-)
Gene ID: k141_371853_88
Type: TC
Location: 82363 - 83466 (-)
Type: TC
Location: 82363 - 83466 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Tissierellaceae
Genus
JAAYTL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.