Cluster: CGMR062052_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR062052
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_298746 | k141_298746_3 | 1243 | 2997 | + | CBM54 |
| pfam | k141_298746 | k141_298746_4 | 3116 | 3829 | + | Y1_Tnp |
| STP | k141_298746 | k141_298746_5 | 3830 | 4765 | + | Pyr_redox_2 |
| CAZyme | k141_298746 | k141_298746_6 | 4862 | 5923 | + | CBM54 |
| CAZyme | k141_298746 | k141_298746_7 | 6056 | 7777 | + | CBM50 |
| pfam | k141_298746 | k141_298746_8 | 7916 | 8776 | + | SLH | PrcB_C |
| TC | k141_298746 | k141_298746_9 | 8861 | 10396 | + | 2.A.66.4.5 |
| pfam | k141_298746 | k141_298746_10 | 10386 | 11468 | - | Spore_permease |
| pfam | k141_298746 | k141_298746_11 | 11481 | 12632 | - | Spore_GerAC |
| TC | k141_298746 | k141_298746_12 | 12629 | 14062 | - | 9.A.11.1.2 |
| TC | k141_298746 | k141_298746_13 | 14139 | 16013 | + | 3.A.1.5.2 |
| TC | k141_298746 | k141_298746_14 | 16110 | 17039 | + | 3.A.1.5.2 |
| TC | k141_298746 | k141_298746_15 | 17039 | 17992 | + | 3.A.1.5.2 |
| TC | k141_298746 | k141_298746_16 | 18005 | 19006 | + | 3.A.1.5.2 |
| TC | k141_298746 | k141_298746_17 | 19009 | 19971 | + | 3.A.1.5.20 |
Gene ID: k141_298746_3
Type: CAZyme
Location: 1243 - 2997 (+)
Type: CAZyme
Location: 1243 - 2997 (+)
Gene ID: k141_298746_4
Type: pfam
Location: 3116 - 3829 (+)
Type: pfam
Location: 3116 - 3829 (+)
Gene ID: k141_298746_5
Type: STP
Location: 3830 - 4765 (+)
Type: STP
Location: 3830 - 4765 (+)
Gene ID: k141_298746_6
Type: CAZyme
Location: 4862 - 5923 (+)
Type: CAZyme
Location: 4862 - 5923 (+)
Gene ID: k141_298746_7
Type: CAZyme
Location: 6056 - 7777 (+)
Type: CAZyme
Location: 6056 - 7777 (+)
Gene ID: k141_298746_8
Type: pfam
Location: 7916 - 8776 (+)
Type: pfam
Location: 7916 - 8776 (+)
Gene ID: k141_298746_9
Type: TC
Location: 8861 - 10396 (+)
Type: TC
Location: 8861 - 10396 (+)
Gene ID: k141_298746_10
Type: pfam
Location: 10386 - 11468 (-)
Type: pfam
Location: 10386 - 11468 (-)
Gene ID: k141_298746_11
Type: pfam
Location: 11481 - 12632 (-)
Type: pfam
Location: 11481 - 12632 (-)
Gene ID: k141_298746_12
Type: TC
Location: 12629 - 14062 (-)
Type: TC
Location: 12629 - 14062 (-)
Gene ID: k141_298746_13
Type: TC
Location: 14139 - 16013 (+)
Type: TC
Location: 14139 - 16013 (+)
Gene ID: k141_298746_14
Type: TC
Location: 16110 - 17039 (+)
Type: TC
Location: 16110 - 17039 (+)
Gene ID: k141_298746_15
Type: TC
Location: 17039 - 17992 (+)
Type: TC
Location: 17039 - 17992 (+)
Gene ID: k141_298746_16
Type: TC
Location: 18005 - 19006 (+)
Type: TC
Location: 18005 - 19006 (+)
Gene ID: k141_298746_17
Type: TC
Location: 19009 - 19971 (+)
Type: TC
Location: 19009 - 19971 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Tissierellaceae
Genus
CABMKH01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.