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Cluster: CGMR061996_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_90250 k141_90250_16 14774 15883 + GH105
TC k141_90250 k141_90250_17 15902 16933 + 2.A.56.1.5
TC k141_90250 k141_90250_18 16930 17415 + 2.A.56.1.5
TC k141_90250 k141_90250_19 17418 18713 + 2.A.56.1.5
pfam k141_90250 k141_90250_20 18718 19551 + AP_endonuc_2
pfam k141_90250 k141_90250_21 19581 19892 + rhaM
TC k141_90250 k141_90250_22 19946 21292 - 4.A.3.2.9
TF k141_90250 k141_90250_23 21502 22215 - GntR
CAZyme k141_90250 k141_90250_24 22482 23900 + GH1
Gene ID: k141_90250_16
Type: CAZyme
Location: 14774 - 15883 (+)
Gene ID: k141_90250_17
Type: TC
Location: 15902 - 16933 (+)
Gene ID: k141_90250_18
Type: TC
Location: 16930 - 17415 (+)
Gene ID: k141_90250_19
Type: TC
Location: 17418 - 18713 (+)
Gene ID: k141_90250_20
Type: pfam
Location: 18718 - 19551 (+)
Gene ID: k141_90250_21
Type: pfam
Location: 19581 - 19892 (+)
Gene ID: k141_90250_22
Type: TC
Location: 19946 - 21292 (-)
Gene ID: k141_90250_23
Type: TF
Location: 21502 - 22215 (-)
Gene ID: k141_90250_24
Type: CAZyme
Location: 22482 - 23900 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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