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Cluster: CGMR061996_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_100727 k141_100727_55 52855 54102 - 2.A.1.2.20
pfam k141_100727 k141_100727_56 54463 54834 + DUF1033
TC k141_100727 k141_100727_57 54773 56848 + 3.A.7.7.1
STP k141_100727 k141_100727_58 57122 57616 + TetR_N
TF k141_100727 k141_100727_59 57709 60387 + TrmB
TC k141_100727 k141_100727_60 60508 60825 + 4.A.3.2.8
TC k141_100727 k141_100727_61 60849 61178 + 4.A.3.2.7
pfam k141_100727 k141_100727_62 61190 62332 + Acetyltransf_9 | SCP2_2 | Acetyltransf_17
TC k141_100727 k141_100727_63 62351 63607 + 4.A.3.2.2
CAZyme k141_100727 k141_100727_64 63693 65081 + GH1
CAZyme k141_100727 k141_100727_65 65101 66192 + GH170
TC k141_100727 k141_100727_66 66698 67339 + 3.A.1.3.12
TC k141_100727 k141_100727_67 67353 67988 + 3.A.1.3.2
TC k141_100727 k141_100727_68 68012 68839 + 3.A.1.3.15
TC k141_100727 k141_100727_69 68946 71357 + 3.A.12.1.1
Gene ID: k141_100727_55
Type: TC
Location: 52855 - 54102 (-)
Gene ID: k141_100727_56
Type: pfam
Location: 54463 - 54834 (+)
Gene ID: k141_100727_57
Type: TC
Location: 54773 - 56848 (+)
Gene ID: k141_100727_58
Type: STP
Location: 57122 - 57616 (+)
Gene ID: k141_100727_59
Type: TF
Location: 57709 - 60387 (+)
Gene ID: k141_100727_60
Type: TC
Location: 60508 - 60825 (+)
Gene ID: k141_100727_61
Type: TC
Location: 60849 - 61178 (+)
Gene ID: k141_100727_62
Type: pfam
Location: 61190 - 62332 (+)
Gene ID: k141_100727_63
Type: TC
Location: 62351 - 63607 (+)
Gene ID: k141_100727_64
Type: CAZyme
Location: 63693 - 65081 (+)
Gene ID: k141_100727_65
Type: CAZyme
Location: 65101 - 66192 (+)
Gene ID: k141_100727_66
Type: TC
Location: 66698 - 67339 (+)
Gene ID: k141_100727_67
Type: TC
Location: 67353 - 67988 (+)
Gene ID: k141_100727_68
Type: TC
Location: 68012 - 68839 (+)
Gene ID: k141_100727_69
Type: TC
Location: 68946 - 71357 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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