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Cluster: CGMR061996_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_100505 k141_100505_8 4202 5374 - 2.A.41.1.2
TF k141_100505 k141_100505_9 5720 6367 + GntR
CAZyme k141_100505 k141_100505_10 6561 7901 + AA7
TC k141_100505 k141_100505_11 8080 9279 + 3.A.1.12.5
TC k141_100505 k141_100505_12 9272 10996 + 3.A.1.12.5
TF k141_100505 k141_100505_13 11565 13508 + HTH_11 | Mga
pfam k141_100505 k141_100505_14 13509 13982 + PTS_EIIA_2
TC k141_100505 k141_100505_15 13996 14280 + 4.A.5.1.5
TC k141_100505 k141_100505_16 14319 15689 + 4.A.5.1.4
Gene ID: k141_100505_8
Type: TC
Location: 4202 - 5374 (-)
Gene ID: k141_100505_9
Type: TF
Location: 5720 - 6367 (+)
Gene ID: k141_100505_10
Type: CAZyme
Location: 6561 - 7901 (+)
Gene ID: k141_100505_11
Type: TC
Location: 8080 - 9279 (+)
Gene ID: k141_100505_12
Type: TC
Location: 9272 - 10996 (+)
Gene ID: k141_100505_13
Type: TF
Location: 11565 - 13508 (+)
Gene ID: k141_100505_14
Type: pfam
Location: 13509 - 13982 (+)
Gene ID: k141_100505_15
Type: TC
Location: 13996 - 14280 (+)
Gene ID: k141_100505_16
Type: TC
Location: 14319 - 15689 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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