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Cluster: CGMR061924_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_64557 k141_64557_36 40897 42372 - GH20
pfam k141_64557 k141_64557_37 42484 45345 - SLH | SLH
CAZyme k141_64557 k141_64557_38 45368 47764 - GH51_1
pfam k141_64557 k141_64557_39 47748 50576 - SLH | SLH | SLH
NULL(UNKNOWN) k141_64557 k141_64557_40 50697 55445 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_64557 k141_64557_41 55494 56339 - 3.A.1.1.34
TC k141_64557 k141_64557_42 56357 56923 - 3.A.1.1.42
Gene ID: k141_64557_36
Type: CAZyme
Location: 40897 - 42372 (-)
Gene ID: k141_64557_37
Type: pfam
Location: 42484 - 45345 (-)
Gene ID: k141_64557_38
Type: CAZyme
Location: 45368 - 47764 (-)
Gene ID: k141_64557_39
Type: pfam
Location: 47748 - 50576 (-)
Gene ID: k141_64557_40
Type:
Location: 50697 - 55445 (-)
Gene ID: k141_64557_41
Type: TC
Location: 55494 - 56339 (-)
Gene ID: k141_64557_42
Type: TC
Location: 56357 - 56923 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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