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Cluster: CGMR061924_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_404170 k141_404170_78 88904 89794 - 3.A.1.1.29
TC k141_404170 k141_404170_79 89810 90787 - 3.A.1.1.25
TF k141_404170 k141_404170_80 91032 92414 + HTH_AraC
TC k141_404170 k141_404170_81 92411 94090 + 9.B.33.1.2
pfam k141_404170 k141_404170_82 94109 95263 + GNAT_C
pfam k141_404170 k141_404170_83 95268 96590 + Glyco_hydro_42 | DUF4832
CAZyme k141_404170 k141_404170_84 96688 98205 - GH36
Gene ID: k141_404170_78
Type: TC
Location: 88904 - 89794 (-)
Gene ID: k141_404170_79
Type: TC
Location: 89810 - 90787 (-)
Gene ID: k141_404170_80
Type: TF
Location: 91032 - 92414 (+)
Gene ID: k141_404170_81
Type: TC
Location: 92411 - 94090 (+)
Gene ID: k141_404170_82
Type: pfam
Location: 94109 - 95263 (+)
Gene ID: k141_404170_83
Type: pfam
Location: 95268 - 96590 (+)
Gene ID: k141_404170_84
Type: CAZyme
Location: 96688 - 98205 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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