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Cluster: CGMR061924_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_404170 k141_404170_25 23332 24195 - 8.A.3.2.4
CAZyme k141_404170 k141_404170_26 24502 25665 + GH179
pfam k141_404170 k141_404170_27 25700 26533 + AP_endonuc_2
TC k141_404170 k141_404170_28 26651 27223 + 1.A.16.5.2
pfam k141_404170 k141_404170_29 27230 27583 - SpoVAC_SpoVAEB
TC k141_404170 k141_404170_30 27609 28622 - 9.A.11.1.1
TC k141_404170 k141_404170_31 28625 29083 - 9.A.11.1.1
Gene ID: k141_404170_25
Type: TC
Location: 23332 - 24195 (-)
Gene ID: k141_404170_26
Type: CAZyme
Location: 24502 - 25665 (+)
Gene ID: k141_404170_27
Type: pfam
Location: 25700 - 26533 (+)
Gene ID: k141_404170_28
Type: TC
Location: 26651 - 27223 (+)
Gene ID: k141_404170_29
Type: pfam
Location: 27230 - 27583 (-)
Gene ID: k141_404170_30
Type: TC
Location: 27609 - 28622 (-)
Gene ID: k141_404170_31
Type: TC
Location: 28625 - 29083 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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