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Cluster: CGMR061924_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_114617 k141_114617_54 54775 57903 + GH106
NULL(UNKNOWN) k141_114617 k141_114617_55 57904 59265 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_114617 k141_114617_56 59249 59959 - GT2
pfam k141_114617 k141_114617_57 59956 61464 - MatE | Polysacc_synt
TC k141_114617 k141_114617_58 61532 62146 - 2.A.115.2.14
pfam k141_114617 k141_114617_59 62251 63243 - SpoIID
pfam k141_114617 k141_114617_60 63432 63731 + Ribosomal_S6
TC k141_114617 k141_114617_61 63769 64212 + 3.A.7.19.1
pfam k141_114617 k141_114617_62 64237 64488 + Ribosomal_S18
pfam k141_114617 k141_114617_63 64587 65096 - dUTPase
CAZyme k141_114617 k141_114617_64 65124 66563 - GH77
TF k141_114617 k141_114617_65 66580 67461 - HTH_AraC | HTH_AraC
pfam k141_114617 k141_114617_66 67584 68549 + AP_endonuc_2
CAZyme k141_114617 k141_114617_67 68540 69613 + GH179
Gene ID: k141_114617_54
Type: CAZyme
Location: 54775 - 57903 (+)
Gene ID: k141_114617_55
Type:
Location: 57904 - 59265 (-)
Gene ID: k141_114617_56
Type: CAZyme
Location: 59249 - 59959 (-)
Gene ID: k141_114617_57
Type: pfam
Location: 59956 - 61464 (-)
Gene ID: k141_114617_58
Type: TC
Location: 61532 - 62146 (-)
Gene ID: k141_114617_59
Type: pfam
Location: 62251 - 63243 (-)
Gene ID: k141_114617_60
Type: pfam
Location: 63432 - 63731 (+)
Gene ID: k141_114617_61
Type: TC
Location: 63769 - 64212 (+)
Gene ID: k141_114617_62
Type: pfam
Location: 64237 - 64488 (+)
Gene ID: k141_114617_63
Type: pfam
Location: 64587 - 65096 (-)
Gene ID: k141_114617_64
Type: CAZyme
Location: 65124 - 66563 (-)
Gene ID: k141_114617_65
Type: TF
Location: 66580 - 67461 (-)
Gene ID: k141_114617_66
Type: pfam
Location: 67584 - 68549 (+)
Gene ID: k141_114617_67
Type: CAZyme
Location: 68540 - 69613 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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