Cluster: CGMR061372_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061372
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_377153 | k141_377153_172 | 156961 | 158151 | + | 3.A.1.122.12 |
| TC | k141_377153 | k141_377153_173 | 158148 | 160085 | + | 3.A.1.122.12 |
| pfam | k141_377153 | k141_377153_174 | 160089 | 161456 | + | OEP | OEP |
| TC | k141_377153 | k141_377153_175 | 161872 | 163374 | + | 2.A.1.6.4 |
| TF | k141_377153 | k141_377153_176 | 163474 | 164400 | + | HTH_1 |
| CAZyme | k141_377153 | k141_377153_177 | 164511 | 166139 | + | AA3 |
Gene ID: k141_377153_172
Type: TC
Location: 156961 - 158151 (+)
Type: TC
Location: 156961 - 158151 (+)
Gene ID: k141_377153_173
Type: TC
Location: 158148 - 160085 (+)
Type: TC
Location: 158148 - 160085 (+)
Gene ID: k141_377153_174
Type: pfam
Location: 160089 - 161456 (+)
Type: pfam
Location: 160089 - 161456 (+)
Gene ID: k141_377153_175
Type: TC
Location: 161872 - 163374 (+)
Type: TC
Location: 161872 - 163374 (+)
Gene ID: k141_377153_176
Type: TF
Location: 163474 - 164400 (+)
Type: TF
Location: 163474 - 164400 (+)
Gene ID: k141_377153_177
Type: CAZyme
Location: 164511 - 166139 (+)
Type: CAZyme
Location: 164511 - 166139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia bockelmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.