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Cluster: CGMR061372_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_342793 k141_342793_142 168497 169663 + 2.A.1.2.39
TC k141_342793 k141_342793_143 169859 170818 + 3.A.1.17.2
TF k141_342793 k141_342793_144 171077 171811 + HTH_6
CAZyme k141_342793 k141_342793_145 171948 173378 + GH1
STP k141_342793 k141_342793_146 173427 174764 - PALP
TC k141_342793 k141_342793_147 174874 175563 - 2.A.89.3.8
pfam k141_342793 k141_342793_148 175591 176064 - 3-dmu-9_3-mt
TC k141_342793 k141_342793_149 176076 176426 - 3.A.5.1.1
TC k141_342793 k141_342793_150 176498 177952 - 9.B.34.1.2
TC k141_342793 k141_342793_151 178340 180478 + 1.B.14.1.17
peptidase k141_342793 k141_342793_152 180529 181344 - S33.UPW
NULL(UNKNOWN) k141_342793 k141_342793_153 181459 181641 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_342793 k141_342793_154 181690 184119 - 1.A.23.1.1
TC k141_342793 k141_342793_155 184570 186300 + 3.A.1.121.3
Gene ID: k141_342793_142
Type: TC
Location: 168497 - 169663 (+)
Gene ID: k141_342793_143
Type: TC
Location: 169859 - 170818 (+)
Gene ID: k141_342793_144
Type: TF
Location: 171077 - 171811 (+)
Gene ID: k141_342793_145
Type: CAZyme
Location: 171948 - 173378 (+)
Gene ID: k141_342793_146
Type: STP
Location: 173427 - 174764 (-)
Gene ID: k141_342793_147
Type: TC
Location: 174874 - 175563 (-)
Gene ID: k141_342793_148
Type: pfam
Location: 175591 - 176064 (-)
Gene ID: k141_342793_149
Type: TC
Location: 176076 - 176426 (-)
Gene ID: k141_342793_150
Type: TC
Location: 176498 - 177952 (-)
Gene ID: k141_342793_151
Type: TC
Location: 178340 - 180478 (+)
Gene ID: k141_342793_152
Type: peptidase
Location: 180529 - 181344 (-)
Gene ID: k141_342793_153
Type:
Location: 181459 - 181641 (+)
Gene ID: k141_342793_154
Type: TC
Location: 181690 - 184119 (-)
Gene ID: k141_342793_155
Type: TC
Location: 184570 - 186300 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_342793_145 vegetarian > omnivore 1.15193 0.04737

🧭 Explore Read Mapping of CGC

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