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Cluster: CGMR061372_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_186173 k141_186173_115 117909 119357 - GH18
pfam k141_186173 k141_186173_116 119548 120300 - Hydrolase | Hydrolase_like | Hydrolase_6 | HAD_2
TF k141_186173 k141_186173_117 120368 121588 - MarR
CAZyme k141_186173 k141_186173_118 121616 122755 - CE9
sulfatase k141_186173 k141_186173_119 122774 123574 - S1_9
TC k141_186173 k141_186173_120 123951 125945 + 4.A.1.1.2
pfam k141_186173 k141_186173_121 126186 127850 + tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
TC k141_186173 k141_186173_122 128428 129831 + 1.B.25.1.13
pfam k141_186173 k141_186173_123 129877 130203 + YbfN
CAZyme k141_186173 k141_186173_124 130217 132874 + GH20
Gene ID: k141_186173_115
Type: CAZyme
Location: 117909 - 119357 (-)
Gene ID: k141_186173_116
Type: pfam
Location: 119548 - 120300 (-)
Gene ID: k141_186173_117
Type: TF
Location: 120368 - 121588 (-)
Gene ID: k141_186173_118
Type: CAZyme
Location: 121616 - 122755 (-)
Gene ID: k141_186173_119
Type: sulfatase
Location: 122774 - 123574 (-)
Gene ID: k141_186173_120
Type: TC
Location: 123951 - 125945 (+)
Gene ID: k141_186173_121
Type: pfam
Location: 126186 - 127850 (+)
Gene ID: k141_186173_122
Type: TC
Location: 128428 - 129831 (+)
Gene ID: k141_186173_123
Type: pfam
Location: 129877 - 130203 (+)
Gene ID: k141_186173_124
Type: CAZyme
Location: 130217 - 132874 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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