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Cluster: CGMR061372_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14587 k141_14587_34 36415 36759 - 2.A.7.22.1
CAZyme k141_14587 k141_14587_35 36756 38420 - GT83
pfam k141_14587 k141_14587_36 38417 39322 - Polysacc_deac_1
pfam k141_14587 k141_14587_37 39319 41301 - Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_14587 k141_14587_38 41301 42281 - GT2
STP k141_14587 k141_14587_39 42268 43422 - Aminotran_1_2
TC k141_14587 k141_14587_40 43820 44575 - 3.A.1.13.1
pfam k141_14587 k141_14587_41 44581 45132 - GSHPx
TC k141_14587 k141_14587_42 45178 46185 - 3.A.1.13.1
Gene ID: k141_14587_34
Type: TC
Location: 36415 - 36759 (-)
Gene ID: k141_14587_35
Type: CAZyme
Location: 36756 - 38420 (-)
Gene ID: k141_14587_36
Type: pfam
Location: 38417 - 39322 (-)
Gene ID: k141_14587_37
Type: pfam
Location: 39319 - 41301 (-)
Gene ID: k141_14587_38
Type: CAZyme
Location: 41301 - 42281 (-)
Gene ID: k141_14587_39
Type: STP
Location: 42268 - 43422 (-)
Gene ID: k141_14587_40
Type: TC
Location: 43820 - 44575 (-)
Gene ID: k141_14587_41
Type: pfam
Location: 44581 - 45132 (-)
Gene ID: k141_14587_42
Type: TC
Location: 45178 - 46185 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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