Cluster: CGMR061372_CGC38
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061372
- CGC Family ID: CGCFAM_05694
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_41597 | k141_41597_6 | 4720 | 5709 | - | 3.A.1.5.27 |
| TC | k141_41597 | k141_41597_7 | 5706 | 6686 | - | 3.A.1.5.27 |
| TC | k141_41597 | k141_41597_8 | 6702 | 7604 | - | 3.A.1.5.39 |
| TC | k141_41597 | k141_41597_9 | 7616 | 8635 | - | 3.A.1.5.39 |
| TC | k141_41597 | k141_41597_10 | 8806 | 10413 | - | 3.A.1.5.27 |
| CAZyme | k141_41597 | k141_41597_11 | 11015 | 12706 | - | GH18 |
| TC | k141_41597 | k141_41597_12 | 13494 | 14825 | - | 2.A.1.4.4 |
Gene ID: k141_41597_6
Type: TC
Location: 4720 - 5709 (-)
Type: TC
Location: 4720 - 5709 (-)
Gene ID: k141_41597_7
Type: TC
Location: 5706 - 6686 (-)
Type: TC
Location: 5706 - 6686 (-)
Gene ID: k141_41597_8
Type: TC
Location: 6702 - 7604 (-)
Type: TC
Location: 6702 - 7604 (-)
Gene ID: k141_41597_9
Type: TC
Location: 7616 - 8635 (-)
Type: TC
Location: 7616 - 8635 (-)
Gene ID: k141_41597_10
Type: TC
Location: 8806 - 10413 (-)
Type: TC
Location: 8806 - 10413 (-)
Gene ID: k141_41597_11
Type: CAZyme
Location: 11015 - 12706 (-)
Type: CAZyme
Location: 11015 - 12706 (-)
Gene ID: k141_41597_12
Type: TC
Location: 13494 - 14825 (-)
Type: TC
Location: 13494 - 14825 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia bockelmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.