Cluster: CGMR061372_CGC36
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR061372
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_222843 | k141_222843_2 | 331 | 1707 | - | 3.A.1.110.6 |
| TC | k141_222843 | k141_222843_3 | 1710 | 3041 | - | 3.A.1.110.6 |
| TC | k141_222843 | k141_222843_4 | 3094 | 4743 | - | 3.A.1.110.6 |
| NULL(UNKNOWN) | k141_222843 | k141_222843_5 | 5257 | 8265 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_222843 | k141_222843_6 | 9071 | 10504 | - | 9.B.18.1.2 |
| CAZyme | k141_222843 | k141_222843_7 | 10578 | 11735 | - | GT4 |
| CAZyme | k141_222843 | k141_222843_8 | 11811 | 12872 | - | GT4 |
| pfam | k141_222843 | k141_222843_9 | 12869 | 13807 | - | ATPgrasp_TupA |
| NULL(UNKNOWN) | k141_222843 | k141_222843_10 | 13800 | 15266 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_222843 | k141_222843_11 | 15241 | 16398 | - | GT4 |
| pfam | k141_222843 | k141_222843_12 | 16418 | 17665 | - | Polysacc_synt |
| CAZyme | k141_222843 | k141_222843_13 | 17786 | 19318 | - | GH39 |
Gene ID: k141_222843_2
Type: TC
Location: 331 - 1707 (-)
Type: TC
Location: 331 - 1707 (-)
Gene ID: k141_222843_3
Type: TC
Location: 1710 - 3041 (-)
Type: TC
Location: 1710 - 3041 (-)
Gene ID: k141_222843_4
Type: TC
Location: 3094 - 4743 (-)
Type: TC
Location: 3094 - 4743 (-)
Gene ID: k141_222843_5
Type:
Location: 5257 - 8265 (-)
Type:
Location: 5257 - 8265 (-)
Gene ID: k141_222843_6
Type: TC
Location: 9071 - 10504 (-)
Type: TC
Location: 9071 - 10504 (-)
Gene ID: k141_222843_7
Type: CAZyme
Location: 10578 - 11735 (-)
Type: CAZyme
Location: 10578 - 11735 (-)
Gene ID: k141_222843_8
Type: CAZyme
Location: 11811 - 12872 (-)
Type: CAZyme
Location: 11811 - 12872 (-)
Gene ID: k141_222843_9
Type: pfam
Location: 12869 - 13807 (-)
Type: pfam
Location: 12869 - 13807 (-)
Gene ID: k141_222843_10
Type:
Location: 13800 - 15266 (-)
Type:
Location: 13800 - 15266 (-)
Gene ID: k141_222843_11
Type: CAZyme
Location: 15241 - 16398 (-)
Type: CAZyme
Location: 15241 - 16398 (-)
Gene ID: k141_222843_12
Type: pfam
Location: 16418 - 17665 (-)
Type: pfam
Location: 16418 - 17665 (-)
Gene ID: k141_222843_13
Type: CAZyme
Location: 17786 - 19318 (-)
Type: CAZyme
Location: 17786 - 19318 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia bockelmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.