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Cluster: CGMR061372_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_135085 k141_135085_10 8335 10023 - 2.A.53.3.9
pfam k141_135085 k141_135085_11 10256 10741 - HbpS-like
TC k141_135085 k141_135085_12 10940 12040 + 9.B.34.1.1
pfam k141_135085 k141_135085_13 12073 15546 - DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter | MFD_D3
TC k141_135085 k141_135085_14 15856 17058 + 3.A.1.125.1
TC k141_135085 k141_135085_15 17051 17755 + 3.A.1.125.1
TC k141_135085 k141_135085_16 17755 19002 + 3.A.1.125.1
STP k141_135085 k141_135085_17 19056 19973 + Glucokinase
pfam k141_135085 k141_135085_18 20065 20901 + SIR2
TC k141_135085 k141_135085_19 20950 21993 - 3.A.1.11.1
TF k141_135085 k141_135085_20 22230 22940 + HTH_6
CAZyme k141_135085 k141_135085_21 22958 24343 - GH4
TC k141_135085 k141_135085_22 24368 25927 - 4.A.1.1.8
TC k141_135085 k141_135085_23 26145 26927 - 3.A.1.11.1
TC k141_135085 k141_135085_24 26924 27784 - 3.A.1.11.1
TC k141_135085 k141_135085_25 27768 28883 - 3.A.1.11.1
Gene ID: k141_135085_10
Type: TC
Location: 8335 - 10023 (-)
Gene ID: k141_135085_11
Type: pfam
Location: 10256 - 10741 (-)
Gene ID: k141_135085_12
Type: TC
Location: 10940 - 12040 (+)
Gene ID: k141_135085_13
Type: pfam
Location: 12073 - 15546 (-)
Gene ID: k141_135085_14
Type: TC
Location: 15856 - 17058 (+)
Gene ID: k141_135085_15
Type: TC
Location: 17051 - 17755 (+)
Gene ID: k141_135085_16
Type: TC
Location: 17755 - 19002 (+)
Gene ID: k141_135085_17
Type: STP
Location: 19056 - 19973 (+)
Gene ID: k141_135085_18
Type: pfam
Location: 20065 - 20901 (+)
Gene ID: k141_135085_19
Type: TC
Location: 20950 - 21993 (-)
Gene ID: k141_135085_20
Type: TF
Location: 22230 - 22940 (+)
Gene ID: k141_135085_21
Type: CAZyme
Location: 22958 - 24343 (-)
Gene ID: k141_135085_22
Type: TC
Location: 24368 - 25927 (-)
Gene ID: k141_135085_23
Type: TC
Location: 26145 - 26927 (-)
Gene ID: k141_135085_24
Type: TC
Location: 26924 - 27784 (-)
Gene ID: k141_135085_25
Type: TC
Location: 27768 - 28883 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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