Cluster: CGMR061372_CGC34
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061372
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_106381 | k141_106381_24 | 37383 | 38819 | - | 1.B.73.1.1 |
| pfam | k141_106381 | k141_106381_25 | 39045 | 39452 | + | PsiE |
| TC | k141_106381 | k141_106381_26 | 39661 | 40551 | - | 3.A.1.1.1 |
| TC | k141_106381 | k141_106381_27 | 40563 | 42140 | - | 3.A.1.1.1 |
| TC | k141_106381 | k141_106381_28 | 42198 | 43475 | - | 3.A.1.1.1 |
| CAZyme | k141_106381 | k141_106381_29 | 43750 | 44721 | + | GH13 |
| TC | k141_106381 | k141_106381_30 | 44714 | 45823 | + | 3.A.1.1.1 |
| TC | k141_106381 | k141_106381_31 | 45856 | 47145 | + | 1.B.3.1.1 |
Gene ID: k141_106381_24
Type: TC
Location: 37383 - 38819 (-)
Type: TC
Location: 37383 - 38819 (-)
Gene ID: k141_106381_25
Type: pfam
Location: 39045 - 39452 (+)
Type: pfam
Location: 39045 - 39452 (+)
Gene ID: k141_106381_26
Type: TC
Location: 39661 - 40551 (-)
Type: TC
Location: 39661 - 40551 (-)
Gene ID: k141_106381_27
Type: TC
Location: 40563 - 42140 (-)
Type: TC
Location: 40563 - 42140 (-)
Gene ID: k141_106381_28
Type: TC
Location: 42198 - 43475 (-)
Type: TC
Location: 42198 - 43475 (-)
Gene ID: k141_106381_29
Type: CAZyme
Location: 43750 - 44721 (+)
Type: CAZyme
Location: 43750 - 44721 (+)
Gene ID: k141_106381_30
Type: TC
Location: 44714 - 45823 (+)
Type: TC
Location: 44714 - 45823 (+)
Gene ID: k141_106381_31
Type: TC
Location: 45856 - 47145 (+)
Type: TC
Location: 45856 - 47145 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia bockelmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.