Cluster: CGMR061372_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR061372
- CGC Family ID: CGCFAM_00433
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_135098 | k141_135098_40 | 39987 | 40511 | + | 2.A.37.1.2 |
| CAZyme | k141_135098 | k141_135098_41 | 40540 | 42204 | - | GH13_29 |
| TC | k141_135098 | k141_135098_42 | 42272 | 43687 | - | 4.A.1.2.4 |
| TF | k141_135098 | k141_135098_43 | 43825 | 44772 | - | LacI |
| TC | k141_135098 | k141_135098_44 | 45198 | 47906 | + | 3.A.3.4.1 |
| CAZyme | k141_135098 | k141_135098_45 | 48050 | 50440 | + | GH20 |
| TC | k141_135098 | k141_135098_46 | 50477 | 53461 | - | 4.C.1.1.7 |
Gene ID: k141_135098_40
Type: TC
Location: 39987 - 40511 (+)
Type: TC
Location: 39987 - 40511 (+)
Gene ID: k141_135098_41
Type: CAZyme
Location: 40540 - 42204 (-)
Type: CAZyme
Location: 40540 - 42204 (-)
Gene ID: k141_135098_42
Type: TC
Location: 42272 - 43687 (-)
Type: TC
Location: 42272 - 43687 (-)
Gene ID: k141_135098_43
Type: TF
Location: 43825 - 44772 (-)
Type: TF
Location: 43825 - 44772 (-)
Gene ID: k141_135098_44
Type: TC
Location: 45198 - 47906 (+)
Type: TC
Location: 45198 - 47906 (+)
Gene ID: k141_135098_45
Type: CAZyme
Location: 48050 - 50440 (+)
Type: CAZyme
Location: 48050 - 50440 (+)
Gene ID: k141_135098_46
Type: TC
Location: 50477 - 53461 (-)
Type: TC
Location: 50477 - 53461 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia bockelmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.