Cluster: CGMR061372_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR061372
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_365092 | k141_365092_2 | 105 | 2708 | + | GT2 |
| TC | k141_365092 | k141_365092_3 | 2822 | 5077 | + | 4.D.3.1.6 |
| CAZyme | k141_365092 | k141_365092_4 | 5092 | 6195 | + | GH8 |
| TC | k141_365092 | k141_365092_5 | 6177 | 9650 | + | 1.B.55.3.1 |
| STP | k141_365092 | k141_365092_6 | 9879 | 11885 | + | EAL | GGDEF |
| TC | k141_365092 | k141_365092_7 | 12159 | 13445 | + | 2.A.23.1.7 |
Gene ID: k141_365092_2
Type: CAZyme
Location: 105 - 2708 (+)
Type: CAZyme
Location: 105 - 2708 (+)
Gene ID: k141_365092_3
Type: TC
Location: 2822 - 5077 (+)
Type: TC
Location: 2822 - 5077 (+)
Gene ID: k141_365092_4
Type: CAZyme
Location: 5092 - 6195 (+)
Type: CAZyme
Location: 5092 - 6195 (+)
Gene ID: k141_365092_5
Type: TC
Location: 6177 - 9650 (+)
Type: TC
Location: 6177 - 9650 (+)
Gene ID: k141_365092_6
Type: STP
Location: 9879 - 11885 (+)
Type: STP
Location: 9879 - 11885 (+)
Gene ID: k141_365092_7
Type: TC
Location: 12159 - 13445 (+)
Type: TC
Location: 12159 - 13445 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia bockelmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.